CANTATAdb - search

Detailed information on CNT30113856

BLAST search results

BLAST vs Swiss-Prot:
sp|P25818|TIP11_ARATH, E-value = 3e-70

BLAST vs NONCODE: nothing found

Expression of CNT30113856

Peptides detected in this lncRNA

>peptide 1 (61 aa)
MSPIERPTSQDVGSNNETNRDGGDNSQIALLRVNGCGVHRVDQSEGQHDLQNDSVPDTNSG*

>peptide 2 (65 aa)
MPRRRVMLPPTKAPKVTAGLTCPPEMLAATATATKRAKPWAMAAEMRPEGVVEMNSANAALRASG*

>peptide 3 (30 aa)
MLAPTMKPIAMGAIIPKLPFFGSMAVAYTV*

>peptide 4 (50 aa)
MMAFFFFFLTIYYYFSVVCGWELLVGVGDEEELVDEPHRTAHQSRCWLQQ*

Sequence

>CNT30113856
CCTAGCTTCCAATAGAAATCACACACAAATTCATTGATCCAGGGAAAAACTACAACATGGTGGGGATCATGATCGTGATTAATTGATGAAAAGATCAACG
GTGCAGATTAAACAACAAAAGAAACTCCCGGGAAGCAAATAAATACACCAAAGTTGGAAATCAAAAGCCGTAGGAGAAACGGTGCGTTTTAATGATGGCT
TTCTTTTTCTTTTTTCTAACAATTTATTATTATTTTTCAGTAGTCTGTGGTTGGGAGCTGCTCGTGGGTGTGGGAGATGAAGAAGAACTCGTAGATGAGC
CCCATCGAACGGCCCACCAGTCAAGATGTTGGCTCCAACAATGAAACCAATCGCGATGGGGGCGATAATTCCCAAATTGCCCTTCTTCGGGTCAATGGCT
GTGGCGTACACCGTGTAGACCAGTCCGAAGGTCAGCACGATCTCCAAAACGACAGCGTTCCAGACACCAATTCCGGTTAGACCGAAAGCTGGAATAGCCT
GCGAAGCACCGAAATAAAACCCATCCAAAAAAGGAAAAAGTTAGTTTAGGCCGTTAATAACGTAACTGTATTGAAACTAACTTTGGTGGAAATGATAAAC
TCACCAAGCCGCCGGTGGAGAACTTGAGGAGGAGGACGGCGACGGTGGAGCCGAGGAGCTGGGCGATCCAGTAGAGGATGCCGCGGAGGAGGGTGATGTT
GCCGCCGACGAAGGCGCCAAAGGTGACGGCGGGGTTGACGTGTCCGCCGGAGATGTTGGCGGCGACGGCGACGGCCACGAAGAGGGCGAAGCCGTGGGCG
ATGGCGGCGGAAATGAGGCCGGAGGGGGTGGTGGAGATGAACTCGGCCAACGCCGCCTTGAGAGCGTCGGGGTGAGTCGCCTCCTCCCGACCACCGATGG
CGATGTTTCGGATCGGCATATTTTTAATGATTTAAGTAATGACGAACGGAAAGTGATTTCGTTTCTCACCGCCGAGAAGGTGGAGAGTTTAGCTAGTAGC
ACTA