Detailed information on CNT30113599


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30315199Ficus caricaCorylus avellana36.3178.9781.41199forward
CNT30381317Ficus caricaManihot esculenta49.2770.3182.96270forward
CNT30401950Ficus caricaBeta vulgaris21.7214.1884.87119forward
CNT30563916Ficus caricaActinidia chinensis14.7834.4790.1281forward
CNT30606919Ficus caricaGossypium raimondii8.5821.4691.4947forward
CNT30646537Ficus caricaCannabis sativa20.828.593.86114forward

Expression of CNT30113599

Peptides detected in this lncRNA

>peptide 1 (47 aa)
MLFEGIRGRFKASPGGGGRGRMDGTPSLGGGAAGPGSVLKSILPASL*

>peptide 2 (56 aa)
GAEPKTDLLERAMNHRAFASSALVPLEVVEELPQVVVEALYVVGSQNKIAVQNSWT*

Sequence

>CNT30113599
GGGTGCTGAGCCAAAAACTGATCTTCTGGAACGAGCAATGAATCATCGAGCTTTTGCCTCTTCGGCTCTGGTTCCTCTGGAAGTGGTGGAGGAGCTTCCT
CAGGTGGTGGTGGAGGCATTGTATGTGGTCGGTTCACAAAATAAGATTGCTGTCCAGAACTCATGGACATAGGCGGTGGAGGTGGACGAACTGATGGAAT
CATTTGAACAACTTGGGGTCTGGGTGGAGGAACAGGGAGCCCACCACTAGTTGGAGCAGAATACTGAATGTTGTTTGAAGGCATACGAGGAAGATTTAAA
GCTAGTCCGGGTGGTGGTGGAAGAGGACGGATGGATGGAACTCCAAGTCTAGGAGGAGGAGCCGCAGGACCAGGAAGTGTTCTCAAATCAATATTACCAG
CATCACTATAATCCTCTCCAATGATATTTTGAGACATTGCTTGGTTTGCTGTTCGCCCAATGCTTCCAGTGTGACCATCCCAAATGACCTGCTTTGGTTG
CTCATCTTTTTTCTTTTCAATCTCAGCCTTGACAGCATTGGAGACTTC