Detailed information on CNT30112551


BLAST search results

BLAST vs Swiss-Prot:
sp|P27518|CB21_GOSHI, E-value = 3e-133

BLAST vs NONCODE:
NONSTUT002515, E-value = 1e-75

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30317234Ficus caricaCorylus avellana55.0955.6381.82341forward
CNT30512563Ficus caricaJuglans regia67.6927.7184.73419forward
CNT30701193Ficus caricaQuercus lobata77.0637.8983.23477forward
CNT30378916Ficus caricaManihot esculenta77.5437.4180.42480forward
CNT30631012Ficus caricaVigna unguiculata77.2237.6482.43478forward
CNT30708305Ficus caricaGlycine max45.0734.5386.02279forward
CNT30561789Ficus caricaActinidia chinensis51.0528.3784.81316forward
CNT3085816Ficus caricaVigna radiata58.857.0582.69364forward
CNT30172025Ficus caricaTrifolium pratense72.0538.6581.17446forward
CNT30245169Ficus caricaAvena sativa70.1151.7382.03434forward
CNT30605341Ficus caricaGossypium raimondii75.7742.9982.3469forward
CNT30648173Ficus caricaRosa chinensis75.6126.9485.04468forward
CNT30360562Ficus caricaLactuca sativa62.242.2682.86385forward
CNT30409824Ficus caricaPapaver somniferum59.1354.4681.42366forward
CNT3028352Ficus caricaTheobroma cacao41.227.5786.67255forward
CNT30326027Ficus caricaAsparagus officinalis47.3351.4984.64293forward
CNT30119392Ficus caricaCitrus clementina58.6439.584.3363forward
CNT3035896Ficus caricaCucumis melo42.9729.5683.46266forward

Expression of CNT30112551

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MAHLLWMTSSSRFLAKVSGSADRPAVSQP*

>peptide 2 (38 aa)
MHPGHQRGQVGQMPLRGRLGRGPHRAGHHQPCSPQRSP*

>peptide 3 (44 aa)
MKVTSEHQTHLGVTLLLAGYKVCGVCPSVVGHWVGKMVGEVLNR*

Sequence

>CNT30112551
ATGAAAGTTACATCTGAACATCAAACCCATCTGGGGGTGACTCTCTTACTTGCCGGGTACAAAGTTTGTGGCGTATGCCCAAGCGTTGTTGGTCACTGGG
TCGGCAAGATGGTCGGAGAGGTTCTCAATCGCTAGCCTTCCGTTCTTCAGCTCCTTGACCTTCAGCTCAGCAAATGCATCCGGGTCATCAGCGAGGCCAA
GTGGGTCAAATGCCCCTCCGGGGTAGACTGGGTCGAGGCCCTCACCGAGCGGGCCACCACCAACCCTGTAGCCCTCAACGAAGCCCATGAGGACAACCTG
GCTGGCCCAGATAGCCAAGATGCTTTGGGCATGGACGAGGTTTGGGTTGCCAAGGTAGTCAAGACCACCCTCTGAGAAGATCTGGGAACCAGCCTTGAAC
CAAACTGCCTCACCAAACTTGACACCGTTCTTCGACAAGATCTCAGGGAAGACACAGCCAAGTGCACCAAGCATGGCCCACCTGCTGTGGATGACCTCGA
GCTCACGGTTTCTGGCGAAGGTCTCGGGGTCAGCTGATAGACCAGCGGTGTCCCAGCCGTAGTCACCGGGGAATTCACCGGTCAGATATGATGGGATTTG
GTCTGAGAATGGTCCCAAG