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Detailed information on CNT30112524


BLAST search results

BLAST vs Swiss-Prot:
sp|Q75KD7|AOC_ORYSJ, E-value = 2e-80

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30317088Ficus caricaCorylus avellana19.2344.8785.98328forward
CNT30703372Ficus caricaQuercus lobata12.5449.7788.32214forward
CNT30616476Ficus caricaSesamum indicum11.0838.186.24189forward
CNT30589607Ficus caricaMusa acuminata14.0160.9783.26239forward
CNT30625785Ficus caricaDaucus carota10.7928.1883.15184forward
CNT30153443Ficus caricaPrunus persica7.3955.2684.92126forward
CNT30573153Ficus caricaVitis vinifera10.4928.3786.03179forward
CNT30148558Ficus caricaBrachypodium distachyon2.9920.9992.1651forward

Expression of CNT30112524

Peptides detected in this lncRNA

>peptide 1 (39 aa)
MIYRTRIPTSTYQKRKKKITLLHLDYITVRSQGQEKQDG*

>peptide 2 (54 aa)
MRAHIFIYIYIYIIYTITLLKRQHFQKKIKDKLKNEPTKKNHKNHIFIMITNIK*

>peptide 3 (32 aa)
MVGDSFKKKTKTRKTRDTCKVVRWKVWSLRRPL

Sequence

>CNT30112524
ATAATTCATAGCCATTGGCTGTTTGACATTGGTACCACTTCCATTAAAAGACCACCATGAGAGATTTGGTAGCATTAGCCACCACCATACTCTATTCAAC
AAACCAACAATAACAAAACGACCACATATGCGAATATCATGCGCGCGCATATATTCATATATATATATATATATATCATTTACACTATTACTTTGCTAAA
ACGACAACACTTCCAAAAAAAAATAAAAGATAAACTCAAAAATGAACCCACTAAAAAAAATCATAAAAATCATATATTTATTATGATTACAAACATAAAG
TAACAGAAATTTCATACATGATATAGAACTCGAATGATATATAGAACTCGAATCCCGACCTCAACTTACCAAAAAAGAAAGAAAAAAATTACATTATTAC
ATCTCGATTACATCACCGTGAGAAGCCAAGGACAGGAAAAACAGGACGGTTGATCTTTCAGTCGGTGTAATTAGCAATAGTGGCGTGGGCCTCACAGGCC
TTGGAGGCGGGAGTGGGCTCGACAGATGGGCTGGGCTCAACGGGCTTGACGAGGAGCTCCTGAGGCAAGTCCTTGATGCCCTTGAGGTAGAAGGTGTAGA
AGAGTTTGAAGGGGAAAATGATCTGCTGCAGCTTCACCTGACCGTATACCCCCTCGAAGATTCCAGACCCACCAGTCACCGCCAGATACGTGTCCTCGTA
CGTCAAGTACGATCCCTGCACCGATATGTGACCGTAGTCTCCGAAGTAGAAGCTGTATATCGCCTCGTACCGGTCACCTTTCATTTCCGGTTTGTTCTGG
ATCAGCACGCATATCCCCGCCGTTATCCCTATCCGTTTTTGCAGGTCTCCGGGACTTGCTTTGTTACTGAAAGGAACGAGATCGCCAAGAGAATTGACAG
ATTTCTGGCTCAACCGGAGGTAGGCAGGGCTGCCACGATCACGCTCGTTGATCTCGTACACAGACAGTTCTTGAACTTTTGCTGAATTATTTAACAAAAA
AAAAAAAAAAAAAAAAGATATCAAATTAATTTGAGTCCACAAAATTTTTAACAAGAAGAAAAAAATATCACTCGAAGTTAACATGAAAGAAAAAAATTAC
AGGCAGGTCTGTCGGATTCCGGTGGAGAAGTGGAAGAGGACTGGCTTCTGCAAGTGAAGGATCTTTTGGGAACGAAAGATGCGGTTTGAAGCTTGGGAAA
TGAAGAGAGAGAAGATGGGTTTGAGATCTTGAAACTATTATAATTCTTAGATTGGAGAGTTTTGATCAAGGGTGATCTTGGAGTTTGGCTGTAAAGTTTT
GCGGAGGAGCTGAAGGAGGTGATGGCTCGGAAAGCGGAGGTCGAGGAAGCCATTGATGGGTACTGGGTACGGGCTAAGGAAAAATATTAGAAGAAAATTT
TAGTGTTTGGAGAGAGAGAAAGTTGAGGGGAAAGTAGTGGAAAGTGAATAATAGAGAGGAACTGTTGGGGAAAGTGGAGCTTGGGGTGGAGTTTGTTTTA
TAATTAAGGCTAGAAACGAAGATCTAGACACAGTTCAAAATCACGTGGGCGATTTTTTTTTTATTATTATTATTTTAAAGGGTGGGTGTGTCGGAAAGAA
GTCGGATGGTCGGAGATTCGTTTAAAAAAAAAACAAAAACAAGAAAAACAAGGGACACGTGCAAAGTCGTACGTTGGAAAGTATGGAGTCTTCGTCGTCC
TTTGAG