Detailed information on CNT30111771


BLAST search results

BLAST vs Swiss-Prot:
sp|P69325|UBIQP_SOYBN, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 7e-165

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30641251Ficus caricaNymphaea colorata70.7149.883.43881forward
CNT30546269Ficus caricaIpomoea triloba63.4888.0882.81791forward
CNT30727322Ficus caricaCorchorus capsularis70.7169.3283.54881forward
CNT30629220Ficus caricaVigna unguiculata69.5880.2883.51867forward
CNT30201346Ficus caricaPisum sativum54.4965.7984.98679forward
CNT30156153Ficus caricaPistacia vera70.7176.4884.34881forward
CNT30605652Ficus caricaGossypium raimondii70.7189.3582.07881forward
CNT30652253Ficus caricaRosa chinensis66.8564.1885.35833forward
CNT30642981Ficus caricaCannabis sativa71.6779.5985.33893forward
CNT3031526Ficus caricaTheobroma cacao70.7181.3582.29881forward
CNT30330420Ficus caricaDioscorea rotundata70.7152.0784881forward
CNT30603625Ficus caricaOryza punctata65.1761.9482.88812forward
CNT30174695Ficus caricaVigna angularis71.4385.4185.17890forward
CNT3051129Ficus caricaCucumis sativus68.4696.3885.23853forward

Expression of CNT30111771

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MSLCWSGGMPSLSWILALTLSIVSELSTSRVMVFP

>peptide 2 (30 aa)
MVFPVRVLTKICIPPRRRRTRCSVDSFWML*

>peptide 3 (53 aa)
MPSLSWILALTLSIVSELSTSKVMVFPVRVLTKICIPPRRRRTKWRVDSFWML*

>peptide 4 (39 aa)
EHEYDINPTTYNLVKARSRATQVIIYIYIYMSYVCVCVD*

Sequence

>CNT30111771
GGGAGCACGAATACGACATTAATCCAACTACTTATAACCTTGTAAAAGCCAGAAGCAGAGCAACACAGGTCATTATATATATATATATATATATGTCCTA
TGTGTGTGTGTGTGTGGATTAAACCAGATAGATGAACTAGAAAGAACACGTACCAAAGCATAACAACGAAAGGAAATACTGTACTTGTATTGAGAAAGAA
AAAACGCAAGTTCATTATTCACAGGCCTCGCAAGGGCCAAACTTAACCACGAAATTCAGTTCACACATATTAATAATATCCATAAGAACAAGAAGGCAGT
AACACGGCGTCAAGCCTTCAAAACAGAGCAAACATCCTTAAAAGGAAAGTCACTTAAAAGCCACCACGAAGACGGAGGACAAGGTGAAGGGTGGACTCCT
TCTGAATGTTGTAATCAGCCAAAGTCCTTCCATCCTCCAACTGCTTCCCTGCAAAAATCAACCTCTGCTGGTCTGGGGGGATTCCCTCCTTGTCTTGAAT
CTTTGCCTTGACGTTATCAATCGTGTCTGAGCTCTCCACCTCAAGGGTGATGGTCTTTCCTGTAAGCGTCTTGACAAAAATCTGCATTCCACCACGGAGA
CGAAGGACAAGGTGAAGGGTGGACTCCTTTTGAATGTTGTAGTCGGCCAGGGTCCTTCCATCCTCAAGCTGCTTCCCAGCGAAGATAAGCCTCTGCTGGT
CTGGTGGGATGCCCTCCTTGTCCTGGATCTTAGCCTTGACATTGTCAATCGTGTCAGAGCTTTCAACTTCCAAGGTAATGGTCTTTCCCGTAAGGGTCTT
GACAAAGATCTGCATACCACCACGGAGGCGGAGGACCAAGTGGAGGGTCGACTCTTTTTGGATGTTGTAGTCAGTGAGAGTACGCCCATCCTCGAGCTGC
TTTCCGGCAAATATCAACCTTTGCTGATCTGGGGGAATTCCCTCCTTGTCCTGGATTTTAGCCTTGACATTGTCGATCGTGTCTGAGCTTTCGACCTCGA
GGGTAATGGTCTTTCCTGTCAGGGTCTTGACGAAAATCTGCATACCACCGCGGAGACGGAGAACCAGGTGTAGTGTTGACTCCTTTTGGATGTTGTAGTC
GGCAAGAGTACGACCGTCCTCGAGTTGTTTTCCAGCAAAAATGAGCCTCTGCTGGTCTGGTGGGATGCCCTCCTTGTCCTGGATCTTAGCCTTGACATTA
TCGATCGTGTCTGAGCTTTCGACCTCGAGGGTAATGGTCTTTCCTG