CANTATAdb - search

Detailed information on CNT30111732

BLAST search results

BLAST vs Swiss-Prot:
sp|P69315|UBIQP_LINUS, E-value = 1e-129

BLAST vs NONCODE:
NONMTRT002043, E-value = 7e-94

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30628664	Ficus carica	Vigna unguiculata	36.89	38.1	87.2	453	forward

Expression of CNT30111732

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MVFPVRVLTKICIPPRRRRTRCSVDSFWML*

>peptide 2 (30 aa)
MVFPVRVLTKICIPPRRRRTKWRVDSFWML*

>peptide 3 (36 aa)
EKEKTQVHYSQASQGPNLTTKFSSHILIISIRTRRQ*

>peptide 4 (61 aa)
MSLCWSGGMPSLSWILALTLSIVSELSTSRVMVFPVRVLTNICIPPRRRRTKWRVDSFWML*

Sequence

>CNT30111732
TTGAGAAAGAAAAAACGCAAGTTCATTATTCACAGGCCTCGCAAGGGCCAAACTTAACCACGAAATTCAGTTCACACATATTAATAATATCCATAAGAAC
AAGAAGGCAGTAACACGGCGTCAAGCCTTCAAAACAGAGCAAACATCCTTAAAAGGAAAGTCACTTAAAAGCCACCACGAAGACGGAGGACAAGGTGAAG
GGTGGACTCCTTCTGAATGTTGTAATCAGCCAAAGTCCTTCCATCCTCCAACTGCTTCCCTGCAAAAATCAACCTCTGCTGGTCTGGCGGGATGCCCTCC
TTGTCCTGAATTTTCGCCTTCACATTGTCGACAGTGTCCGAGCTCTCCACCTCCAAGGTGATCGTCTTCCCAGTCAAGGTCTTCACGAAGATCTGCATGC
CACCCCTCAGGCGCAGCACAAGGTGAAGGGTCGATTCCTTCTGGATGTTATAATCCGCAAGAGTCCTACCATCTTCGAGCTGTTTCCCAGCGAAAATCAG
CCGCTGCTGGTCAGGGGGGATTCCCTCCTTGTCTTGAATCTTTGCCTTGACGTTATCAATCGTGTCTGAGCTCTCCACCTCAAGGGTGATGGTCTTTCCT
GTAAGCGTCTTGACAAAAATCTGCATTCCACCACGGAGACGAAGGACAAGGTAATGGTCTTTCCCGTAAGGGTCTTGACAAAGATCTGCATACCACCACG
GAGGCGGAGGACCAAGTGGAGGGTCGACTCTTTTTGGATGTTGTAGTCAGTGAGAGTACGCCCATCCTCGAGCTGCTTTCCGGCAAATATCAACCTTTGC
TGATCTGGGGGAATTCCCTCCTTGTCCTGGATTTTAGCCTTGACATTGTCGATCGTGTCTGAGCTTTCGACCTCGAGGGTAATGGTCTTTCCTGTCAGGG
TCTTGACGAAAATCTGCATACCACCGCGGAGACGGAGAACCAGGTGTAGTGTTGACTCCTTTTGGATGTTGTAGTCGGCAAGAGTACGACCGTCCTCGAG
TTGTTTTCCAGCAAAAATGAGCCTCTGCTGGTCTGGTGGGATGCCCTCCTTGTCCTGGATCTTAGCCTTGACATTATCGATCGTGTCTGAGCTTTCGACC
TCGAGGGTAATGGTCTTTCCTGTCAGGGTCTTGACGAATATCTGCATACCACCACGGAGGCGGAGGACCAAGTGGAGGGTCGACTCTTTTTGGATGTTGT
AGTCAGCGAGAGTACGACCGTCCTCAAG