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Detailed information on CNT30111703


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH33|UBQ11_ARATH, E-value = 3e-158

BLAST vs NONCODE:
NONMEST001181, E-value = 1e-107

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3061830Ficus caricaArabidopsis lyrata71.0146.5583.79654forward

Expression of CNT30111703

Peptides detected in this lncRNA

>peptide 1 (53 aa)
MPSLSWILALTLSIVSELSTSKVMVFPVRVLTKICIPPRRRRTRCSVDSFWML*

>peptide 2 (41 aa)
MSLCWSGGMPSLSWILALTLSIVSELSTSRVMVFPVRVLTNI

Sequence

>CNT30111703
ATTAAACCAGATAGATGAACTAGAAAGAACACGTACCAAAGCATAACAACGAAAGGAAATACTGTACTTGTATTGAGAAAGAAAAAACGCAAGTTCATTA
TTCACAGGCCTCGCAAGGGCCAAACTTAACCACGAAATTCAGTTCACACATATTAATAATATCCATAAGAACAAGAAGGCAGTAACACGGCGTCAAGCCT
TCAAAACAGAGCAAACATCCTTAAAAGGAAAGTCACTTAAAAGCCACCACGAAGACGGAGGACAAGGTGAAGGGTCGATTCCTTCTGGATGTTATAATCC
GCAAGAGTCCTACCATCTTCGAGCTGTTTCCCAGCGAAAATCAGCCGCTGCTGGTCAGGGGGGATTCCCTCCTTGTCTTGAATCTTTGCCTTGACGTTAT
CAATCGTGTCTGAGCTCTCCACCTCAAGGGTGATGGTCTTTCCTGTAAGCGTCTTGACAAAAATCTGCATTCCACCACGGAGACGAAGGACAAGGTGAAG
GGTGGACTCCTTTTGAATGTTGTAGTCGGCCAGGGTCCTTCCATCCTCAAGCTGCTTCCCAGCGAAGATAAGCCTCTGCTGGTCTGGTGGGATGCCCTCC
TTGTCCTGGATCTTAGCCTTGACATTGTCAATCGTGTCAGAGCTTTCAACTTCCAAGGTAATGGTCTTTCCCGTAAGGGTCTTGACAAAGATCTGCATAC
CACCACGGAGACGGAGAACCAGGTGTAGTGTTGACTCCTTTTGGATGTTGTAGTCGGCAAGAGTACGACCGTCCTCGAGTTGTTTTCCAGCAAAAATGAG
CCTCTGCTGGTCTGGTGGGATGCCCTCCTTGTCCTGGATCTTAGCCTTGACATTATCGATCGTGTCTGAGCTTTCGACCTCGAGGGTAATGGTCTTTCCT
GTCAGGGTCTTGACGAATATC