Detailed information on CNT30111654


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30315343Ficus caricaCorylus avellana26.9741.6985.96178forward
CNT30516813Ficus caricaJuglans regia20.38.7490.3134forward
CNT3069543Ficus caricaQuercus suber20.317.2284.33134forward
CNT30164954Ficus caricaPistacia vera11.9725.8288.6179forward
CNT30508717Ficus caricaSolanum lycopersicum14.745.3383.5197forward
CNT3081457Ficus caricaBrassica juncea10.7632.8788.7371forward
CNT3050332Ficus caricaCucumis sativus17.8824.9583.9118forward

Expression of CNT30111654

Peptides detected in this lncRNA

>peptide 1 (56 aa)
MNWVQRKIYLYNVTFGLYMLDWWERCLFNTLVVVLMWFVFYNGSRYAVEFSKRHLW*

Sequence

>CNT30111654
AATTTTCAACCGCGAAGGGTAAAACGGACTTAAAAATGTTTTGACATCGTCAAACTCGTCCGATAATTTGAGAATTCCGAAAATATGTAAGAAGGATTTT
TTATTTTTTTGATCTGAAAAAAAAAAAAAAAAAAAAAAAATTAGTCCTTTATCTCACAGCCATTCCTGTCCAATCTTTCTCTCTCGCTGATTCTCATCAG
ATTCAGAGCAATGAACTGGGTTCAACGTAAAATCTACCTTTACAATGTCACTTTTGGGCTCTACATGTTAGATTGGTGGGAGCGTTGCCTTTTTAATACT
TTGGTGGTGGTCTTGATGTGGTTCGTGTTTTATAACGGATCACGGTACGCAGTCGAGTTCTCCAAGAGGCATTTATGGTGAAATCCAGAAGCGTAGCTTG
GACGGGAAAAGCAAGGATGGAGTAGTGGCACGGATCATTTGAATGATAGTGCAACATTTTATTTTCTGATTCCCATAAACTTGTGAAAAAGTTTTATTCA
CCTGTATAACCAATTATACTTGTCACAGGTTTTTCTCTTTTGTTATTATTCTTGAGGATTTTGGCAGCAACTCAAGTTGTCCCTTCTATTTTCCTTGTTT
TTCAGAAGAACTATTTCAGTGAAATCTAAGGTTGTTCATATTGAAAAATTCATAGTGAGA