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Detailed information on CNT30111613


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30693736Oryza longistaminataOryza sativa97.5815.5499.65282forward
CNT30101702Oryza longistaminataOryza rufipogon35.6418.0199.03103forward

Expression of CNT30111613

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MAAGRHLTLAGKTYKCPSAAVKFSPESFHLIYICSVSRTI*

Sequence

>CNT30111613
TTTTTTTCCTGTTGGACTGCTGTGTTTTCCCCTGATTTTTCCATGGTTATGTGTTTATAATTTTACTCCTTTGACTTGACATCTATTTGTAGCACAAACG
GATAAGGAATCAGAGTTGTACATTTTATTTTCTAGCAGTTATCCATGGGATGGCAGCTGGGAGGCATCTGACCCTGGCTGGTAAGACATACAAGTGCCCC
TCTGCAGCTGTAAAATTCAGTCCTGAATCTTTTCACTTAATTTATATCTGTAGTGTTAGCAGAACAATATGATCATTAGCCATTGAGAT