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Detailed information on CNT30111437


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695116Oryza longistaminataOryza sativa82.7924.5881279reverse complement

Expression of CNT30111437

Peptides detected in this lncRNA

>peptide 1 (52 aa)
GMSDLCSPMIVLLNDEADAFWCFERLMRRLMHTAICWGGEPASAPCVYHSSA*

>peptide 2 (31 aa)
MFMVLFRRELSFGDSLYLWEVNTTGHFGMSY*

Sequence

>CNT30111437
AGGAATGAGTGATTTATGCTCACCGATGATAGTGCTGCTCAATGACGAAGCAGATGCATTTTGGTGCTTTGAGAGATTAATGCGTAGACTGATGCACACA
GCAATCTGTTGGGGTGGAGAACCAGCTTCAGCACCTTGCGTCTATCATTCAAGTGCTTGACCCAAAATTACATGACCACCTAGAAACACTTGGTGGGGGT
GATTATCTCTTTGCATTCCGCATGTTCATGGTATTGTTTCGGCGTGAATTATCATTTGGGGACTCGCTATACCTTTGGGAGGTAAACACTACTGGTCATT
TTGGCATGTCGTACTAAATCTTAAACATCCTATTCAT