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Detailed information on CNT30111333


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT002550, E-value = 2e-156

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3099505Oryza longistaminataOryza rufipogon90.775093.72462forward

Expression of CNT30111333

Peptides detected in this lncRNA

>peptide 1 (32 aa)
QRRPPRPSPPPLQVLIAPAADSCDFIAVVEDP*

>peptide 2 (31 aa)
MCLTVCEHGVCESENYVFWCWCVLEMKICLMY

Sequence

>CNT30111333
CCAACGCCGCCCCCCGCGCCCGTCGCCGCCGCCGCTGCAGGTGCTCATCGCCCCTGCCGCCGACTCCTGTGATTTCATCGCTGTCGTAGAGGACCCTTGA
GGAGGAAGAGGAGTATCGTACGATTACTGCTATGAGATTCAAGACTGAGGATGACGGCTTCAAGTTATAGGCCATTACATTTTGCAATCATGTCTCAAAG
TTGTTTTGTCATTCCTACAATTTCAGGAAAGTAGAAGAAGATGTGTGAGATGGATAAGAAGTAGAAGCAGCCCTTTGCTATGCACTTTACATAGTTTTGT
CATGCTCTTGGTCGTAATGAATACATTGGACTGTAATGAATCTTTGATGTGCTTTCCTGTAGTATGATGGATGTCCTGCTATTTTGAGTTGTGCTCGCAT
GGTTGAATTTTGATGTGTTTAACTGTATGTGAACATGGTGTATGCGAATCTGAAAATTATGTGTTTTGGTGCTGGTGCGTTCTGGAAATGAAGATATGTT
TGATGTATT