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Detailed information on CNT30111026


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697771Oryza longistaminataOryza sativa60.5568.8595.93221forward
CNT30677224Oryza longistaminataSetaria viridis12.620.4491.346forward
CNT30296526Oryza longistaminataTriticum aestivum15.0721.9194.5555forward

Expression of CNT30111026

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MPLLCKLKFLSSKMNSTQVDDNSVASHWRHPICWHRSRT

>peptide 2 (32 aa)
MVFLFMAANANHYGKVYMQNVYKLFLSHNLYK*

Sequence

>CNT30111026
AGCTGGACATGAGACCGTAAACAAGTAACATACAGACAATGGTGTTCCTGTTTATGGCTGCCAACGCCAACCACTACGGCAAAGTGTACATGCAAAATGT
CTACAAGCTTTTTTTATCACACAACCTATACAAATAATGCAACCAGTAATTAACTCGACCTGGCTAGAGATTTCACTCGCCAAAATTGTCCTGGTACCAA
AAGAATCAGTTTAAACAACCAATAATAGCACATCTACAACTTGAAAGATGCCTCTTCTGTGTAAATTGAAATTCTTATCATCTAAAATGAACTCTACACA
AGTGGATGATAACTCAGTAGCTTCCCATTGGAGGCATCCCATATGCTGGCATAGGTCCAGGACCC