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Detailed information on CNT30110772


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30693450Oryza longistaminataOryza sativa69.5715.4795.65391forward
CNT30101670Oryza longistaminataOryza rufipogon70.1112.7895.69394forward

Expression of CNT30110772

Peptides detected in this lncRNA

>peptide 1 (34 aa)
FFLSSLLALFPSLFFSFSSLFSPGRERERESSRW*

>peptide 2 (35 aa)
FFSALFSLSFLLSFFLSLHCFLRGERERESHLAGE*

>peptide 3 (79 aa)
VFSQLSSRSLSFSLFFFLFIVFSGERERERVISLVSESWLAGACEREGLPAREREAEAEFHGGISSSTYEMCSFDQIGC*

Sequence

>CNT30110772
GTTTTTTCTCAGCTCTCTTCTCGCTCTCTTTCCTTCTCTCTTTTTTTCTTTCTCTTCATTGTTTTCTCCGGGGAGAGAGAGAGAGAGAGAGTCATCTCGC
TGGTGAGTGAGAGCTGGCTTGCCGGCGCGTGCGAGAGAGAGGGCTTGCCGGCGCGCGAGAGAGAGGCAGAAGCTGAGTTTCATGGTGGCATTTCAAGCTC
AACATATGAGATGTGCTCATTTGATCAAATCGGTTGTTAAAGGTATTAGAGAAAATATCACTGATTGATACATGTCTTCTCTGCAGTGATTTCTGACAGA
TGATTTCTCCTTGAATAAGCTTGTAAAATTCTTTACCAATTTTTGTGAGATTCCATTTTGTTCTCTCTGTGTGCACATGCCACAATGAAAAATGTTAATG
AAGTTCTGAGTTAGTAATGGCCTAGTTTTGTACTGTTGAATCTGTTTTCTACACTAGTATAGAGTTTTTTTTTGTTTCATTTTGTATGGTTCCGACCATT
TGTATTGTGTCAAAGTTTTGAACGATAATTTCGTGTCTAATTTCTATTGGGCTCTGTGTTTT