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Detailed information on CNT30110762


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690122Oryza longistaminataOryza sativa76.6969.3591.44362forward
CNT30574657Oryza longistaminataOryza barthii79.8762.4287.8377forward

Expression of CNT30110762

Peptides detected in this lncRNA

>peptide 1 (34 aa)
HPIRSSPCVACCLTLLHRSETRRLQTAEEAVEQE*

>peptide 2 (31 aa)
PPHPLISLRGLLLDAAASIRDEKAPDSRGSS*

Sequence

>CNT30110762
CCACCCCATCCGCTCATCTCCTTGCGTGGCTTGCTGCTTGACGCTGCTGCATCGATCAGAGACGAGAAGGCTCCAGACAGCAGAGGAAGCAGTTGAACAG
GAGTAACAAGGGAAGGAAAAGGTGTGGAGGGTTCCAACGTTGGAGGAGTTGAGTCGGAGTATCGAAGGAGTTAAGGTACCTAATGACATTGATCGGCATG
GGGCGAGAGTAGCACCCTTGGTCTACACCTTATTATTGCACACTATTCAAATTTAGTTTTGGACTGTGAATCTGTTTAGCATAAGTTTTGCATAGGACTT
GTAAAGGTCATTTAAGTTCTGGTCCTTGTTTTCACACGGAATTTATGGAGCTAGGATTGTCGACGTTTGATGTCTCGACTACGGTATTTGGACAGTATGG
GGATCGTCGGTGCTAGGATATACGCGAGACTAAGGTAAAAGAGATGGAGACAGGGATTTTTATACAGGTTCG