« Back to Oryza longistaminata search


Detailed information on CNT30110740


BLAST search results

BLAST vs Swiss-Prot:
sp|C0LGW2|PAM74_ARATH, E-value = 7e-06

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30134735Oryza longistaminataLolium perenne32.799.2288.8981forward
CNT30574936Oryza longistaminataOryza barthii10070.1797.17247forward

Expression of CNT30110740

Peptides detected in this lncRNA

>peptide 1 (63 aa)
NCLGISASMTFFFRGVEVADCLSLEIGKHTLSTETTSVMLGLSIDAFSRQFMARSITVCRWTV*

Sequence

>CNT30110740
GAACTGTCTTGGAATCTCTGCATCCATGACGTTCTTCTTTCGAGGGGTTGAAGTTGCCGATTGTCTCTCACTTGAAATCGGCAAGCACACCTTAAGCACG
GAAACAACCTCGGTCATGCTTGGCCTGTCAATCGATGCGTTTTCGAGGCAGTTCATGGCGAGGTCTATCACAGTCTGCAGGTGGACAGTTTGAGGGTCCA
TGAATACTGGGGGCTGACCAGTGACAATCTCCAAGAGGACAATTCCG