Detailed information on CNT30110454


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30104253Oryza longistaminataOryza rufipogon46.361294.12102reverse complement

Expression of CNT30110454

Peptides detected in this lncRNA

>peptide 1 (71 aa)
APISSSISSSSTNCSCRPNLQYLFAPASCKSPPRSRTTSTLLRAPELAEWRRTLRVCCFNLGGRKDLRKQKW

>peptide 2 (67 aa)
PLPSPRPSPVPPPTAHAAPISSTSSLRPAANRRQDPGPPRRCCARRSWLSGDAPCGYAASISEEGRI*

>peptide 3 (48 aa)
RSHLLVHLQFLHQLLMPPQSPVPLRSGQLQIAAKIQDHLDAAARAGVG*

Sequence

>CNT30110454
CCGCTCCCATCTCCTCGTCCATCTCCAGTTCCTCCACCAACTGCTCATGCCGCCCCAATCTCCAGTACCTCTTCGCTCCGGCCAGCTGCAAATCGCCGCC
AAGATCCAGGACCACCTCGACGCTGCTGCGCGCGCCGGAGTTGGCTGAGTGGCGACGCACCCTGCGGGTATGCTGCTTCAATCTCGGAGGAAGGAAGGAT
TTGAGGAAGCAGAAATGGAC