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Detailed information on CNT30110157


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONOSAT000582, E-value = 5e-52

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697196Oryza longistaminataOryza sativa56.6277.5296.97231forward
CNT30578597Oryza longistaminataOryza barthii53.1996.4489.86217forward
CNT30116840Oryza longistaminataOryza nivara56.3761.6691.3230forward
CNT30604527Oryza longistaminataOryza punctata49.2663.8189.05201forward

Expression of CNT30110157

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MRPFKSYNSSKIMIYMFVYFICIVYLVFISLFPRFAC*

Sequence

>CNT30110157
GTCTTTTCTTTAATAGGCATTAATTGGAATTAATCTTGTAAAATTCATAATTAATTCATATGAAGTCAGAATGAGGCCGTTCAAGTCTTATAATTCATCT
AAAATCATGATTTACATGTTTGTTTACTTTATATGTATTGTTTATTTGGTTTTTATTAGTCTTTTTCCTCGTTTTGCGTGTTAGCTTGTCGTTTCCGTCG
TTTCGAAGGATCGTAAGTGCATCGGAAGTGTTCAAGAAGACTAATTGAAGACCGAATATTGCAAGTTGAAGACAAGTTGCGAAGGAGAAGACGTTTGGCT
TATACCCCAGTTGAGCTGCCTGTGGGAGTGGAGCCGGAGCTTCGCTAGACCGTAATTCCGCTGCAGTTTTCTTTTCTTTTGTAAGTATGTAACATTATTA
TATTGATG