Detailed information on CNT30110154


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30694556Oryza longistaminataOryza sativa38.954.2297.641144reverse complement
CNT30184327Oryza longistaminataSecale cereale2.1830.0592.1964reverse complement

Expression of CNT30110154

Peptides detected in this lncRNA

>peptide 1 (53 aa)
VMDMCNKKLFIEFSHNTCFNITDPNDRHYKKKKKRRGGGGKYTLCPKINQLFN*

>peptide 2 (32 aa)
MPKLNVHRHATLGSFSTVSTHMALRIKKFEFL*

>peptide 3 (81 aa)
MLNQLRPVFIDKYGQELAGLNARDLWNLENQLKMSVCDVNSHISDEGHLSMCFINICNFVLIPFRLKQSIFCHRTTFDTRN*

>peptide 4 (69 aa)
MFEQLTLRFGDRFTCQSCLIIFHRTLTIKRACITSCGCMHTAMIKQNTEHHHRGISPARTSSIIVKCLS*

>peptide 5 (30 aa)
MHNQLWMYAHSHDQTKHRTPSSGDQSSQNI*

>peptide 6 (29 aa)
MYPIEKGVTKRKIQKIDLLLASLRNGHGT*

Sequence

>CNT30110154
AAGTAATGGACATGTGCAACAAAAAACTATTTATAGAGTTTTCACATAACACATGTTTCAACATTACTGATCCAAATGACAGACATTACAAAAAAAAAAA
AAAAAGAAGAGGAGGAGGAGGCAAATACACCCTTTGTCCCAAAATAAATCAGTTGTTCAACTAAGTCCAAGAAGAGGAGGAGGAGGAAGAGAAAACCAAT
GTTTGAACAACTAACACTAAGGTTTGGTGACCGCTTCACTTGCCAGTCCTGCCTCATCATCTTCCACCGTACGCTGACGATCAAACGTGCATGCATAACC
AGTTGTGGATGTATGCACACAGCCATGATCAAACAAAACACAGAACACCATCATCGGGGGATCAGTCCAGCCAGAACATCTAGCATAATAGTTAAATGCC
TAAGTTAAATGTTCATAGGCATGCTACGCTTGGTTCTTTTTCGACAGTTAGCACACACATGGCTTTGAGAATAAAAAAGTTCGAATTCTTGTGAAAGTTT
GGCATAGTAGTGGAAATAGTAAACATCTGCCAGACGATGTGGTAATATCTAGTAAATCCTAAATTATTGAGCACTAGGCAAACATGTTTTAATTAAGTTT
CTAGACCGTACAGGTGCCTGGGTTGATAACTACTAGCAATTACACCATAAAACAATAATAACGTACAATACAAGTCACAGGCTGACCTGAAACAAGCAGG
TCATGTTAATTTTTTACCAAGAAAACAATCAATGGTAATCATGTGTTCATAAGATAAAAATCTTAGGAGGATCAAAAACTACTTATAATTTATCGAGGAC
ATAGGAGGTGTTCCATGTAGTCATATACTCATATTACATAGAATATATCTGTGAACAAGATCATGATTCAAATAAGGAGAATGAAGATCCCAAAATATAT
CGCATTCTTAATGTGAATTCGATAGTTTTATACTGCATGTATCCAATTGAAAAAGGTGTCACGAAGAGGAAAATACAAAAGATAGATCTATTGTTAGCTT
CCTTAAGGAATGGACATGGTACGTAACAAACTATAACAGCAAGCAATAAATAGTAATGCAGTATTAAGCTCTACTCAAAGCTATCGATCCCCATGAACAC
AAAATTAGTATTCATTCCTTAAGAAACCATTACTACATTAATTGTCAACATTGAATTTACTGTTCAAGATTAAAAAAAAACCTGATTGAACTTCCTAGCT
TAGTTGCAGTTCTGACAGACGGAGGCAGCAAGCTTGAGGCAACAACTGCACAACTTGCAAGAAAGTCATAGTATGATGACCCATTGATTCTGCAAAGAGT
TAAATCACAGGTCAATAACGAAGCTAATGCTTTTTCAAGTCAATTATATTTTTTCAGGCAATAGCAAAATCATGTAAGAACTGTATGAAACAAAAGTGTA
AAGATAAATACGTTCAGGTCAGGAATGAATCGTTTTATATGTAAATGAAATATTCTGCAATGGAAAGTGAAGCAGCTTCTCTTCCATAATATTAGTAAGT
TAGTGAGAAAGAATACATGTATAAGAAAGCAAATTGTGACAATTTTTCTCAGAATGTTAAATCAACTCCGTCCTGTGTTTATTGACAAATATGGACAGGA
GCTTGCTGGCCTAAATGCAAGAGATCTCTGGAATTTAGAGAACCAACTCAAAATGAGCGTATGTGATGTCAATAGTCACATCTCAGATGAAGGTCACCTT
AGCATGTGCTTCATTAATATCTGCAACTTTGTTTTAATTCCATTTAGATTGAAGCAATCAATCTTCTGCCATAGGACCACCTTTGACACAAGGAATTGAA
GAACTAAGTAGGAAGGTTCAACCTGCTGATGGTGCGCTTTGACCATACCAACATAATTTTATATAATGAGACTGCCCGCTTCCTTGGGTGTACCTATTAA
TGGAAAAGGGGCTCTATGCAGTCCTTAACATGGAAACTTATCCACAAGAAAAGTTTTGAGCTCTTGAGAGGAGGAATATACTCCCTCTAATCTTGAACAG
AGCCAACCCCAACATAGCTCCAGAAAAGGAGAAAGTCATCTTTTCCTTAATTTAGAAGATATACCATTCCACTCACAAAGGCAATGGTATAGCAATAAGC
CATGCTTTGCTTGCAGCAAAACTACATCTGCTTAATGCAGATGTGCTGCAAGCTGGGTTCTGTACACAATTGTCTTGTTTATCCATGAGACCATGAAACA
TTTACACACAAAGAGGTTCACTTATCTATCACAGCATACTGAAATATGATAGCCTGAAAAGTTGGAAACTTATGGTGGCAAAAAACAGGGTCATTTTCTG
AATATTAACAACAGACATCATATAGTATGTATTAGACTGCTAGTACAGCACAACATATATCTGGAAAGGTGATTATAAGCAGAATAGCATATCACTGTTA
CTTCTATGCAAATTTTCCATCTCCATTTGCAGGACAGTTGCCCATTTCTCAAGTCACAAAAAGATACTCTTTAACTAGAGTTCACATGACAATGCATGGT
TGTTCATTGGTGAGTTGTTGTTAAAGACAACACACAATGATCATGTAAGTTCATTTTATTTTTTAAAAAGATGAAACTATTCACTGTAGCAAAATCATGG
GAAAATAANNNNNNNNNNACACAATGATCATGTAAGTTCATTTTATTTTTAAAAAAAATGAAACTATTCACTGTAGCAAAAATCATGGGAAAATAAACTG
GGAATAAAAAAAAAATCTTACATCCATTGTAATAGCATGTGTTTCTTGTGACTTGTGACTCCCTTGCAAGTAATGCAGTTGTAACCTCATGCTTGGTGCC
ACCATATGCAATAACTGGTTGAAAACATTGCAATGATCAGAATATGCAAAGCAATAGCTGTAAACAAGGCACCTCGATTGAAATCACTCATTAATGCCCT
ATGAGCTATTGTAGAGATGGTGAATGCACAATTTTCAAAAT