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Detailed information on CNT30109982


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30694122Oryza longistaminataOryza sativa77.0964.3488.68424forward
CNT30554279Oryza longistaminataOryza glaberrima70.3670.1189.92387forward

Expression of CNT30109982

Peptides detected in this lncRNA

>peptide 1 (51 aa)
MRSFAPQVWRVPTLEELSRSIEGVKVPNDIDRHGAGVAPLDYTLSLHTSEI*

Sequence

>CNT30109982
TATGTTCTAGGTTTCGATTTTAGTAAATATCCCTTGTAACCATCGTTAGTTGAATATAGTGGTTTATGCGTAGTTTTGCTCCACAGGTGTGGAGGGTTCC
AACGTTGGAGGAGTTGAGTCGGAGTATCGAAGGAGTTAAGGTACCTAATGACATTGATCGGCATGGGGCGGGAGTAGCACCCTTGGACTACACATTATCA
TTGCACACATCTGAAATTTAGTTTTAGACTATAATTTTTTTTGCTCAGCATACGTGTTGCATAGAACTTGTAAAGGTCATTTAAGGTTCTGATTCTTATT
TTTTCACGTGGGGTTTGTGGAGCTAGGATTGTGGATTATATCGGTATTGACTTTTCTTATAATTGCCTGTCGTGGATGTCCGTATTTTTAGGAGAGACTC
TGCCGAAATTTCTAATAATTTTGGGACTTAGTTTTTTAGTGTATTTTGATATGGCATTCTAGGTACGTGGTTACCTGGGTGTTACAATGTATGTAGGAAT
TCATATTAATTTCCTGTATTATGCTCTGAATAGTAGCATAAGGATTTGAT