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Detailed information on CNT30109962


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30552163Oryza longistaminataOryza glaberrima76.5327.7898.67225forward
CNT30369227Oryza longistaminataOryza glumipatula32.6517.8410096forward
CNT3099612Oryza longistaminataOryza rufipogon5017.3398.64147forward

Expression of CNT30109962

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MWRNPEYLTPNPSLQNHRRETNPSIKNPIKTHQEPS

Sequence

>CNT30109962
CCATTTCTCTCTTCTTCTAACTCTTGCCGGAAAAGAACTCTAAAATTCCTCACCAAAACTGACAAAACTGAAGGGGAAAAACTCTAAAAGGGGGAATTTT
TTTTTTCTCTTGTGCAAAAATTTGACGGAGACGAACACGAATCGATCGAATCCGTCAATCTCCTCGACAGAAACCACACGGCCTTATGTGGAGGAACCCG
GAATACTTGACCCCGAACCCGTCCCTGCAAAATCACAGACGAGAAACAAACCCATCAATCAAAAACCCCATAAAAACCCACCAAGAACCCTCCA