Detailed information on CNT30109910


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONOSAT000419, E-value = 2e-68

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30597256Oryza longistaminataOryza meridionalis86.1539.0293.47199reverse complement
CNT30371462Oryza longistaminataOryza glumipatula64.948.9896.67150reverse complement
CNT30103992Oryza longistaminataOryza rufipogon48.9218.2397.35113reverse complement
CNT30578175Oryza longistaminataOryza barthii48.9218.5297.35113reverse complement
CNT30118058Oryza longistaminataOryza nivara40.6917.696.8194reverse complement

Expression of CNT30109910

Peptides detected in this lncRNA

>peptide 1 (31 aa)
HAILIFLTQYTALCTCNPTLMNCILSRLGPS*

Sequence

>CNT30109910
GCATGCTATCTTAATTTTCTTGACTCAGTACACTGCTCTGTGTACGTGTAATCCTACGTTGATGAATTGCATCTTGTCCAGACTTGGACCTAGCTAACTA
CCTACTCCAGCTTCTTGCTGAGGAAATCTGCAGTAGTAGTACTCCCTCGTTGTGATACGCAACAAAATTGTTTAATGTGATCCTGCTATATATAGAAAAT
CATCTCTATTATTTTACAGGCATAAAACAAG