Detailed information on CNT3010986


BLAST search results

BLAST vs Swiss-Prot:
sp|O65101|PSAH_MAIZE, E-value = 3e-19

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30521234Zea maysSetaria italica57.8925.8685.03187forward
CNT30656050Zea maysTriticum dicoccoides22.2911.7387.572forward
CNT30130278Zea maysLolium perenne22.298.2191.6772forward
CNT30678866Zea maysTriticum urartu22.2911.5287.572forward
CNT30720193Zea maysTriticum spelta22.2913.1987.572forward
CNT30338878Zea maysEragrostis tef26.9311.1593.187forward
CNT30368187Zea maysSorghum bicolor70.5993.0685.09228forward
CNT30582794Zea maysEchinochloa crusgalli71.5252.8684.85231forward

Expression of CNT3010986

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MERADGLATASFLPEMELPARPLMATGFTETAAREAMAAS*

>peptide 2 (67 aa)
GIEWVGNIMAPVAGCRARARQSRRGQSRRSCRRTWPPRRLRGACGWSGPTAWRRRASFRRWSCRRDP*

Sequence

>CNT3010986
GGAATTGAATGGGTTGGAAACATCATGGCACCTGTAGCGGGTTGTAGGGCGAGGGCGCGTCAGAGCCGTAGAGGTCAAAGTAGACGCTCTTGTCGCCGTA
CTTGGCCACCACGGCGGCTGCGCGGGGCCTGCGGATGGAGCGGGCCGACGGCCTGGCGACGGCGAGCTTCCTTCCGGAGATGGAGCTGCCGGCGAGACCC
TTGATGGCCACGGGCTTCACGGAGACGGCGGCGAGGGAGGCCATGGCGGCTAGCTAAGCAAGCTTGACGCGCGCACTGGACAGTGGCGCTGTTGGGGGTT
GCTGGTGTCCCGGTGCGTGCGTA