Detailed information on CNT30109627


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT005030, E-value = 1e-107

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30596657Oryza longistaminataOryza meridionalis38.7822.1685.12121forward
CNT30574763Oryza longistaminataOryza barthii98.7234.1896.75308forward

Expression of CNT30109627

Peptides detected in this lncRNA

>peptide 1 (46 aa)
DSENSEYVEQDSEVECVSTQQQGEDSGYELCFLCGHCSAEGGEGNE*

>peptide 2 (59 aa)
IRRIRSTWSKTLRLSVFPRSSKERIPVMSYASCVVIALPRAARAMSDLLQLGSCPVGLP*

Sequence

>CNT30109627
AGATTCGGAGAATTCGGAGTACGTGGAGCAAGACTCTGAGGTTGAGTGTGTTTCCACGCAGCAGCAAGGAGAGGATTCCGGTTATGAGTTATGCTTCTTG
TGTGGTCATTGCTCTGCCGAGGGCGGCGAGGGCAATGAGTGATCTCTTGCAGCTTGGCTCTTGCCCGGTTGGTTTGCCCTAGTGGGGTTGTGGCACCACC
GGTTTTATCTTTTGCTTATGATCTCTATTTGAGACTTCCGCTGCTATATTTATGTGTTGTATGTTGGGACCTCGGACTCTTTTATGTGTCATGTACCTCG
CTGCACTTTGAC