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Detailed information on CNT30109114


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT003609, E-value = 7e-76

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30694340Oryza longistaminataOryza sativa40.2924.1989.63164forward

Expression of CNT30109114

Peptides detected in this lncRNA

>peptide 1 (59 aa)
AQQDGSCPCQMGLPTQFLLLDRHEKTEMPQQSLQQKYIGQRTGSGFGHNYKDVRMMGGS*

>peptide 2 (52 aa)
RSRMALALAKWDYQLSSYCLTDMKRLKCLSNLCSRNISGNALAPVLGTTTKM*

Sequence

>CNT30109114
AGCGCAGCAGGATGGCTCTTGCCCTTGCCAAATGGGACTACCAACTCAGTTCTTACTGCTTGACCGACATGAAAAGACTGAAATGCCTCAGCAATCTCTG
CAGCAGAAATATATCGGGCAACGCACTGGCTCCGGTTTTGGGCACAACTACAAAGATGTGAGGATGATGGGTGGTTCCTAAAAGTTGCGTGCCGCAAGTT
GGAGTCGATGGTTATTCAACTATTTGCCAATCATAGGTGGAGGTTCACAAGTAGGCTTCAATAAATGTGTTCTCCTTATTTTGGCTTGGTTTCCTTTGTT
TTTGTTTGGTGTGTTCTTTTTATCTGAACTACACTCTTTTCTAGGGTGCTACTTTATAATAATTGGCTATAGCTCTTTTTGAAGAAAGGCCGGGATGTTA
TATTCCA