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Detailed information on CNT30108884


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30100946Oryza longistaminataOryza rufipogon99.1656.7799.79474forward
CNT30575679Oryza longistaminataOryza barthii10085.298.74478forward
CNT30116236Oryza longistaminataOryza nivara10055.7199.37478forward

Expression of CNT30108884

Peptides detected in this lncRNA

>peptide 1 (75 aa)
HRRKLSTHRGKLRRWRGCGLRVDGATATRHSPRRRRSPLRRPSPPLATFSPIACPPIRVGEDQPPPSWDPIPLAW*

Sequence

>CNT30108884
CACAGGAGGAAACTATCAACGCATAGGGGAAAGCTGCGGCGGTGGCGCGGGTGCGGATTGAGAGTCGACGGCGCGACGGCGACGCGGCACTCTCCCCGGA
GGCGGCGCTCTCCCCTCCGCCGACCGTCCCCTCCGCTGGCCACCTTCTCACCAATTGCATGTCCACCAATTAGAGTTGGAGAAGACCAGCCTCCTCCTTC
TTGGGACCCTATACCCTTGGCCTGGTAGTACTGGATTGATTTTAAGACCAATTTTCAGTACTGGAGATGGGAACACTGGAGCTGGGTGACTGAAGCGCAT
GGTGGCATTAGTGCTAAGCTTAAACACTTGCATTCAATTTGTAGTTTAGCTCTTAGCTGGCTACTTCTATTTATTCTAAGAAAAACAACTGAATTGTACC
CATTTTGATTAATCTGTGACCTTTTCATGTCCTTCAAATTTCATCATCTTCTGCATTTGTTGATCTAATACGGCCCAG