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Detailed information on CNT30108806


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30118042Oryza longistaminataOryza nivara42.6821.4195.52134reverse complement

Expression of CNT30108806

Peptides detected in this lncRNA

>peptide 1 (29 aa)
ERPPHHHLQASGELGCTRSREEREVYVWW*

>peptide 2 (66 aa)
MVMDAVRAVAMPSLSPATVAARPSSRRLHKVAAMATQKPTSGTRRGTTVYFPVGEPGPRQTTSGKAA

Sequence

>CNT30108806
AGAGAGGCCACCACATCATCATCTCCAAGCTAGTGGTGAGCTAGGCTGCACGAGAAGTCGAGAAGAACGAGAGGTGTACGTGTGGTGGTAGGAGAGGGAA
TCCATCGATCCATGGTGATGGACGCAGTCAGAGCGGTGGCGATGCCGTCGCTGTCGCCGGCCACCGTCGCGGCGAGGCCGAGCAGCCGCCGCCTTCACAA
GGTCGCCGCCATGGCCACCCAGAAGCCCACCTCCGGCACAAGAAGGGGGACGACGGTGTACTTCCCGGTGGGGGAGCCGGGGCCGCGGCAGACGACGAGC
GGGAAGGCGGCGGC