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Detailed information on CNT30108241


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30555721Oryza longistaminataOryza glaberrima84.6759.7597.39613forward
CNT30604653Oryza longistaminataOryza punctata79.9749.7486.36579forward

Expression of CNT30108241

Peptides detected in this lncRNA

>peptide 1 (42 aa)
MFFHLFLPKSTPSPVSTTNQIYPQVVEIDRSFDLRGWLQQHS*

Sequence

>CNT30108241
CACTACTGGAATTCCACGGGGTCCCTAGGGTTTTCAAATGTTCCCTAGAGCCCTAATTAGAACCCAAGGGGATAATAAGTTCCCTAGAGCCGAAACTAAA
ACTCAAGGGAACTGAGATGATCCCTAGAGTTTTTGCTTGCTCCTAGGGAAACTAGTACAGTTGGCACTGATAGGAGAACCACGGTGGCAGGGTCCACTGA
CTTCTTTAGAAACCAACCACGTGGAAAGGTTGTAATAGTTTCTCCCGCCTTGTGAATCCAAAATTTGGACTGTGCACCATATTCTCTTTCCATTGGAAAG
TAATAAAGTACCCCAAGCTGCTAAACTTTCCCCTTTGTTCTTCCTTCAACATGTTCTTTCATCTCTTCCTCCCCAAATCAACTCCCTCTCCAGTCTCCAC
CACCAACCAAATCTACCCTCAAGTAGTAGAGATCGACAGGAGCTTCGACCTTCGAGGGTGGTTGCAGCAGCACTCCTGAAGGCCGTGGTGGGCGTGGGCT
GATTGCATCTGTTTGCGGCTGAGAGGCGACGCAGGGACAGGGGTGAATCAAGGCCATGGTGACCTGTGCAGCGTGGTGTTGCCGAGCTGCTCTCTAGTTA
GCATTTAGCAAAGATCGGTAAGGTCGAGAAGTCAAGAACTTGAGCTACGCTTGCAAAACTTGATAAATGAATCATATTACTGCGGTTAGTAATCAAAGCT
AGAAATCATGTGCTTATTATATTG