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Detailed information on CNT30108176


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30100371Oryza longistaminataOryza rufipogon101.7560.8488.94696forward
CNT30575438Oryza longistaminataOryza barthii92.496.9388.92632forward

Expression of CNT30108176

Peptides detected in this lncRNA

>peptide 1 (74 aa)
GGGGASGGWLMRAPLGGQHMRGAGAAVRRSAGRLRLGSQARGAVEAGGGRWGEAGCVRSLSASHRAGGRSLSRS*

Sequence

>CNT30108176
GGCGGGGGGGGGGCCAGCGGGGGGTGGCTGATGAGGGCTCCGCTGGGCGGCCAGCATATGCGCGGTGCGGGGGCCGCAGTCCGTAGAAGCGCGGGGAGGC
TGCGACTGGGTAGCCAGGCGCGTGGAGCGGTGGAGGCAGGCGGCGGCCGGTGGGGGGAGGCGGGCTGCGTGCGCTCGTTGTCTGCGTCGCATCGAGCTGG
AGGAAGGAGCCTATCGAGGAGCTGAGCAAGCGAGCTGTGGTTCTCGATTACTGACTGATTTCCTGGTGGCTGAAAATCAGCAACGGAAGGTATCTCAAAG
AGGTAGGTTAGGTTAGATTTGAATAGCTATTTTAACCGTGGGTGATGTGCCACCAATCCCAACTACTTGTGGTAATGGGATTGTTGCAGTGGAAGAGGCT
GCTGAACAGGTAGAAGGGGTGGAAGTACAATTGGGTTCATTTCATATTGCTGGACGAGCGGAAGAGAAAACTCAACGCCCAGTGGCTAGTGAATCCAAGT
GAAGATGCACCTGTTCAGGGAGAAAAGTTGGGTGTTCTTGTTTGCAAGTTGTTGTGTACCGTCTATACAGTAGACTTTAGTTATTTGATTTGCAGACAAT
TTAGCTTCGGTTTCATTAACTAAGGCAACAATTTCAACCTGTATGTCCATTAATTATCTATTTGTTGTGCGTGTTATATCATAT