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Detailed information on CNT30108174


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30552833Oryza longistaminataOryza glaberrima58.4199.8194.24521forward
CNT30100341Oryza longistaminataOryza rufipogon49.4450.4693.2441forward

Expression of CNT30108174

Peptides detected in this lncRNA

>peptide 1 (74 aa)
GGGGASGGWLMRAPLGGQHMRGAGAAVRRSAGRLRLGSQARGAVEAGGGRWGEAGCVRSLSASHRAGGRSLSRS*

Sequence

>CNT30108174
GGCGGGGGGGGGGCCAGCGGGGGGTGGCTGATGAGGGCTCCGCTGGGCGGCCAGCATATGCGCGGTGCGGGGGCCGCAGTCCGTAGAAGCGCGGGGAGGC
TGCGACTGGGTAGCCAGGCGCGTGGAGCGGTGGAGGCAGGCGGCGGCCGGTGGGGGGAGGCGGGCTGCGTGCGCTCGTTGTCTGCGTCGCATCGAGCTGG
AGGAAGGAGCCTATCGAGGAGCTGAGCAAGCGAGCTGTGGTTCTCGATTACTGACTGATTTCCTGGTGGCTGAAAATCAGCAACGGAAGGTATCTCAAAG
AGATTTGAATAGCTATTTTAACCGTGGGTGATGTGCCACCAATCCCAACTACTTGTGGTAATGGGATTGTTGCAGTGGAAGAGGCTGCTGAACAGGTAGA
AGGGGTGGAAGTACAATTGGGTTCATTTCATATTGCTGGACGAGCGGAAGAGGGAAAAGCTAGGTCCTGTGTGTGCTCATCTCCTGGTAGATTAATTCAG
AGTTTCAGAATTCAACACTTGGGGCTGCGTCCAACTCTTAATTAATGTGTTCTAAGGAAAAATATCTCAAGTGCTGAACAGGACTGGGTGTACCTGACAA
TTATAGAGGTGTTGATGTAGAAACTTTGTGGAGAAATGGTGCCAAAGTTTGATTAGTTTGGTTTGACCTTGTAGAAAACTCAACGCCCAGTGGCTAGTGA
ATCCAAGTGAAGATGCACCTGTTCAGGGAGAAAAGTTGGGTGTTCTTGTTTGCAAGTTGTTGTGTACCGTCTATACAGTAGACTTTAGTTATTTGATTTG
CAGACAATTTAGCTTCGGTTTCATTAACTAAGGCAACAATTTCAACCTGTATGTCCATTAATTATCTATTTGTTGTGCGTGTTATATCATAT