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Detailed information on CNT30107920


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30100680Oryza longistaminataOryza rufipogon68.0891.1195.39369forward

Expression of CNT30107920

Peptides detected in this lncRNA

>peptide 1 (91 aa)
IIEIHLNGSKLLKFISNSFELRIGPFNLQNSSKIELYMFVYFSCTVSLVFIRVFPCFACQRVESVVSEDRGREEKSSEDQSEEARSVVLLS*

Sequence

>CNT30107920
TAATTATAGAAATCCATTTAAATGGCTCAAAACTTCTAAAATTCATATCTAATTCATTCGAACTCCGAATTGGGCCATTCAACTTGCAAAATTCATCTAA
AATTGAGCTCTACATGTTTGTTTACTTTTCATGTACTGTTTCCTTGGTTTTTATTAGAGTTTTTCCTTGTTTTGCGTGCCAGCGTGTAGAATCCGTCGTT
TCGGAAGATCGCGGTCGCGAGGAAAAGAGTTCAGAAGATCAAAGTGAAGAAGCAAGAAGTGTAGTGCTTCTGAGCTGAAGACGAAGTTAGAAGACCAAGG
CTCAGACCCCAGTTGAGTTTTGCCTGTGGAGTGGAGCTGAAGCCCCGCTAGGATCGTCTTTTTCCGCTGCTGTCGTTCTCTTTCGGTGTGAGGACTAAGT
GCCTCTTCTGTAAGTATTTTACGCTTTATTTACGTTTGGAACTGTATATTACTTGTCGTTTTGTGTACCCTGGCTGGTCTTGGACAGGGATTTAATACAC
AAAATAGTCTGGAAATTTAGGGCTAAATTTCTGGGCGTGACA