Detailed information on CNT301078


BLAST search results

BLAST vs Swiss-Prot:
sp|P14641|TBA2_MAIZE, E-value = 9e-34

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30611949Zea maysArabis alpina41.9733.2489.57115forward
CNT30360852Zea maysLactuca sativa74.8237.3482.44205forward

Expression of CNT301078

Peptides detected in this lncRNA

>peptide 1 (57 aa)
MASLSSSIATSVCSRREEPRPEPVPPPTALKTRKPWRPVQLSASFLMRSRHRSTISLP

Sequence

>CNT301078
GTAGACCAAGACAGTAAGTCAGTACCTGGGACACAAGCCTGTTGAGGTTGGTGTAGGTTGGGCGCTCAATGTCAAGGGATCGGCGGCAGATGTCGTAGAT
GGCCTCATTGTCCAGCAGTATAGCCACATCAGTGTGCTCGAGGAGGGAGGAACCAAGGCCAGAGCCCGTTCCTCCACCAACAGCGTTGAAGACGAGGAAG
CCCTGGAGACCAGTGCAGTTGTCGGCAAGCTTCCTGATGCGATCAAGGCACAGGTCAACAATCTCCTTGCCAAC