« Back to Oryza longistaminata search


Detailed information on CNT30107443


BLAST search results

BLAST vs Swiss-Prot:
sp|P93779|RL5_SOLME, E-value = 4e-07

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30552477Oryza longistaminataOryza glaberrima55.2590.2998.4437forward
CNT30115661Oryza longistaminataOryza nivara61.3198.5894.02485forward

Expression of CNT30107443

Sequence

>CNT30107443
CTAAAAAGGAAAAAGTAACATAAAACACTGACAAGTGAAGAGCCAGGCAGAACACATTTTGATCAATATCCAAACGGCAGCTTCTCACATAAATAAGATA
ACCGATAGCTCAAGGTTGAGAATCAAAAACCGAAAGAAATAGGTTCTTTGAGTAGAGTGCAGAACATAAACAAAAATGCCTGTTGCAAATTGCAAGACTA
CAGGTAAACTTAAATGCCATATGGAGTTTGTTTGGCAGCATAAGATGAAACTACTGTGATAAGGCTACACTCTCTCACTCGTCATCCTCTTCCTCGTCAT
CATCATCAGCACCAGCTGAGGAGTTGAGAGCATTCAATCTTTCGACGAGCCTGGCCTTCCTCTGCTCGTAGGTCAGCTTCTTGAGGTACTCACTGAAGTG
GGCTTGGAATTTCTCAGGTTCCTCCTCAGCCATAGACTGCAACAAGTACATAAGAAGAAAATTTATCCTGATGAGAATCAAAATAAAGCAGACTGAGCTA
AACAGTAACAAATAATCCAGCCTACTTTATATAATGCTTTAGTCAACGTTATAAACATCAAGGCAGCTACATAATTCCTAATACAACACACAGCAATGTC
AAAATAGCACGAACAATTGATCTAATAGTGCCAGCTCACCCTCATGTAGTCAGCCACGTGCCCACCGTAGATGTACTTGCGGTGAATATCAGAATCAAGC
TGCTTCTCGTCCTTCTTGAACCCAGCAAACCTCTTGTCACTGTGAGGAATGTCAAGACCACCATCCAAAGCTCCCTGCAGAGAAGAACAGA