Detailed information on CNT30107369


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30555984Oryza longistaminataOryza glaberrima69.0384.0990.27185forward
CNT30597157Oryza longistaminataOryza meridionalis30.611.8791.4682forward

Expression of CNT30107369

Peptides detected in this lncRNA

>peptide 1 (47 aa)
ISSNTLWACCTFFSAPPPQPIFVIPPSLDLVYRLVVRQRLQLPGGEG*

>peptide 2 (45 aa)
HFVEHLVGVLHLLLRSTTAADLRHSAVSRPCVSVSCEATSATSRR*

>peptide 3 (34 aa)
TFRRTPCGRAAPSSPLHHRSRSSSFRRLSTLCIG*

Sequence

>CNT30107369
ACATTTCGTCGAACACCTTGTGGGCGTGCTGCACCTTCTTCTCCGCTCCACCACCGCAGCCGATCTTCGTCATTCCGCCGTCTCTCGACCTTGTGTATCG
GTTAGTTGTGAGGCAACGTCTGCAACTTCCAGGAGGTGAAGGTTGATCAAAAATTATATCAAGAATAACGACTATCCTGAGCAGGCAAGTCATCACTATT
CCTTGAACATGTTGATCCCAATTGCGAAATTATTTTGTTTACAAATAAAATTGCATGCAATGATGAAC