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Detailed information on CNT30106877


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30577830Oryza longistaminataOryza barthii23.6810.6194.9599forward

Expression of CNT30106877

Peptides detected in this lncRNA

>peptide 1 (60 aa)
LRESEGEKREIQKGERKLTFSPRQVGGDEVGILAVDAVSPAKCRFLAPVFSGSVISIWCL*

>peptide 2 (53 aa)
FERVRERRERYRKERGSLPFLLAKSEATRWGFWPSTPSRQRNAVSLLRYFLDL*

Sequence

>CNT30106877
GCTTCGAGAGAGTGAGGGAGAGAAGAGAGAGATACAGAAAGGAGAGAGGAAGCTTACCTTTTCTCCTCGCCAAGTCGGAGGCGACGAGGTGGGGATTTTG
GCCGTCGACGCCGTCTCGCCAGCGAAATGCCGTTTCCTTGCTCCGGTATTTTCTGGATCTGTGATTTCGATTTGGTGTTTGTAGCGGAGATTTGATGGTG
GTATCTATGCTGCAGTGAGGCCTTCATTATGTTTGATATATATAATGCTAAGCATGCTCAAGCTTGTGTAGCAGCGAGGCTTGCGTAGCAGAAACTGCTA
GGTGCTCTTGGACTTGGTGAGGCATTAAGACTTGTGTTCATTTGTTTGTCTAAGCTCTAAAGATGAAAATATTTGAACATGATGTGAAGTTCCAAAAGAG
TATATTGTATTGTCCGAA