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Detailed information on CNT30106741


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT006322, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30596758Oryza longistaminataOryza meridionalis60.4666.2594.97636forward
CNT30371127Oryza longistaminataOryza glumipatula89.3569.6889.26940forward
CNT30593965Oryza longistaminataEragrostis curvula5.4220.2894.7457reverse complement

Expression of CNT30106741

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MFKFTTLFMFHFSGSFCLRYSSTMRSHRSAI*

>peptide 2 (41 aa)
MSSFAPQVWRVPTLEELSRSIEGVKASTRRTCVMDKLCYFV*

>peptide 3 (33 aa)
MLHIHILLYVQVHDIIHVSFLRKFLFTLFKYHA*

Sequence

>CNT30106741
GTTATTTAATACAAATCGGTAAAAGGTTTATATGTTCTAGGTTTCGATTTTAGTAAATATCCCTTGTAACCATCGTTAGTTGAATATAGTGGTTGATGAG
TAGTTTTGCTCCACAGGTGTGGAGGGTTCCAACGTTGGAGGAGTTAAGTCGAAGTATCGAAGGAGTTAAGGCAAGTACAAGACGGACCTGTGTGATGGAT
AAACTGTGTTACTTTGTTTGATTTCATTTACTCAATTATTATTTGAAGCTTCCTATTATCAATTGTGTGGTTTTAGTATTATGCTACATATTCATATTTT
ACTTTATGTTCAAGTTCACGACATTATTCATGTTTCATTTCTCCGGAAGTTTTTGTTTACGTTATTCAAGTACCATGCGTAGTCATAGGAGTGCAATTTG
AATCTTTTTTTTTTACATTATTCAAGTACCATGCGTAGTCATGGGAGTGCAATTTGGATCTTTATTCATGATCCTTGAGAAGCGCTGATCACGCTTGCTC
GGCTTACCGGTAATGCTAAGAGGATATTCACACCTGCCCGGGAGGGAACTACTACTTTTTGCCTCCTTCGTATTAAATTAAAAGAAATCAAATGTTTCAT
ATTGGTTTCTTCTTGCATTAAACATGTGTATATTTTACTAGTTCAATATTGTACTTGCTGAGTATTCTTTACTCACTCTTGTGTTTAATTTGGTTTTTAG
GTACCTAATGATATTGATCGGCATGGGACGGGAGTAGCACCTTTGGACTACACATTATTGTTGCACACTACTGAAATTTAGTTTTAGACTATGTTTCTGC
TTAGTATAAGTTTTGTGTAGAACTTGTAAAGGTCATTTAAAGTTCCGGTCCATAGTTTCACGGGGAATTCATGGAGCTAGGATGGTTTGGATTGTGTGGG
TTATATCGTTATTGAGTATCTTATAACTGCCTGTCGTGGATGTTCGTATTTTTAGGGGAGACTCTGCCGAAATTTCTAATAGTTTTGGGAGTTAGTGGTT
TTTAGTATTTTTGGTGTGGCACTCTAGGTACATGGTTATCTGGGGTGTTACA