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Detailed information on CNT30106472


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30369475Oryza longistaminataOryza glumipatula27.4230.2395.25295forward

Expression of CNT30106472

Peptides detected in this lncRNA

>peptide 1 (39 aa)
MKISRCLSEFACCMFATYFISSMHLLKNYHRIASRVKMK*

>peptide 2 (62 aa)
MQQEASNNLFENLDSNMVLKYEQLSSSFHFPLLVWVFTVLFEWYLYSQRSSPITYRTFLISQ*

Sequence

>CNT30106472
GTTACTTATAACATGCTGATGGATGGTTAATGTAAGTTAGATCAGATTGAAGCTGCGAAGGACTTACTGGCTGACAGGGAAAAGCAAGATGACTTATGAT
TTGACGATTGATTCATAAGGATGGTTGGCTGATACACTGGGAGGAGCAAAAGGATGTAATGTGACGATCAGTTGGAGATTCTTACTATAAAACTTACTGG
TTTATCTTAGTTTTGTTTGCTCATCCCTTTCTCATTTTCCTTTTTATTCCCATATTGAAATTGATTTCAAATAAAGAGGATGTCTAATGCTGCATTTTGA
GATGGAAATTTATTTCTTAAATTACTGTCCAATTAACCCAAGTATGTGAGAATGCTAAGTTTTTGGATTGTTGCTTAGGCCACAACTCTTAGGGTATGAG
GTATTTTTCTGAAATTTTAACTTGTGTGCAAATTTGCATTTCATGGTTCACTAACTTAGTTTTTGGTTATCAACTTCTGTAGTTTCTAGCGCACAACAAT
TAAATGAAATGACTATTTGTGTTCTTATTTCTTCACACAGTAGCAAAAAAAAGGGATGAAAATTTCTCGTTGTCTGAGTGAATTTGCATGTTGTATGTTT
GCAACGTACTTTATCTCTTCTATGCATTTATTAAAGAATTACCACAGGATTGCAAGTAGAGTAAAGATGAAATAAACATGCATGCAGCAAGAAGCCAGCA
ACAACCTGTTTGAAAATTTGGACAGCAATATGGTTCTAAAATATGAACAATTGAGCAGTAGTTTCCACTTTCCACTACTGGTTTGGGTATTCACAGTGTT
GTTTGAGTGGTATTTATACTCGCAGAGGTCATCACCCATCACCTATAGAACATTTTTGATTTCTCAATAATCATATGAACTGGCACCTTGTACATGTACT
TTTGATGACTGTTTCGATAACTGAATTATTTTTCTGGCTGTGGTTTGAACTTTGAATCCATCACCTTAATTAAAATGGTTCCACGGTCAAGAATTTAGAG
CAGCATTATTATGGCATTCAACATATTGAGAATTTGAGATGAAGTAATATGAGAGAAAAGAAATGTTGGTTAGCTG