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Detailed information on CNT30106471


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30574986Oryza longistaminataOryza barthii69.6527.3492.14280reverse complement

Expression of CNT30106471

Peptides detected in this lncRNA

>peptide 1 (31 aa)
SSTVTYAGSKVLTVFFDTDCFGERTLSNWSS*

>peptide 2 (30 aa)
MDCGRKGSLRNQLIYLAKGEGRLEEQIICI*

>peptide 3 (34 aa)
MLAARCSPCSLTRTALVKGLYPTGQVDLAINMTF*

Sequence

>CNT30106471
TCATCGACGGTGACATATGCTGGCAGCAAGGTGCTCACCGTGTTCTTTGACACGGACTGCTTTGGTGAAAGGACTCTATCCAACTGGTCAAGTTGATCTT
GCAATAAACATGACATTTTGAATAAACACTCTTGGAATTGTTCCCAAAGTTGACACACACACGGCGCTAGTAATGTCTGGTCTCAGTAAGGAAGGGAAAG
CAGGCGAAGCTAGGTGAGATGAGACAGATGGGAGTTAAGCCTAGTGAATTTATATATAGCACGCCCTGCTGAATCTGAATGGATTGTGGAAGGAAGGGAA
GTTTGAGGAACCAGCTGATCTATCTGGCCAAAGGGGAAGGAAGGTTGGAAGAACAGATTATTTGCATATAATGTTCTAATATGTGGGTTCTGCAAAGTGG
GG