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Detailed information on CNT30106410


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONOSAT000672, E-value = 2e-136

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690346Oryza longistaminataOryza sativa64.8987.8694.71586forward
CNT30553255Oryza longistaminataOryza glaberrima35.3342.4896.24319forward
CNT30101102Oryza longistaminataOryza rufipogon33.4452.2596.03302forward

Expression of CNT30106410

Peptides detected in this lncRNA

>peptide 1 (68 aa)
MDFIEIGHSSSPVESIIFWRQPVVFLASDNQVAYLRVICVGARVKLKFLPKPGVQSYKLVLFQPSSQI*

>peptide 2 (83 aa)
MKPQPACYPNSIPTIYPSTTHSLCMKYEPICYPISASTREQLNPSHSSTKAQPRPMLATYPLNQSDYSIYPLFSKKPKTTHKI*

Sequence

>CNT30106410
TAGCAAACACCCAAATCCCAGCCGATATTCATCCTACCTCGATATCGGCTTAATCAAATGAAACCCCAGCCAGCCTGCTATCCAAATTCCATACCAACCA
TTTACCCTTCTACTACCCATAGCCTATGCATGAAATACGAGCCGATATGCTATCCTATTTCAGCATCGACTCGAGAACAACTAAATCCTAGCCATTCTTC
TACCAAAGCCCAACCTCGACCAATGCTAGCCACATATCCACTTAACCAGTCAGATTATTCGATATATCCCCTATTCTCCAAGAAACCAAAAACCACACAT
AAAATATAAGTGACAATTGTTACTTAATCCCCTCTAGCCTCAAACCCTTTAGAACCTACCCATATTAGCCCAGTAATCCCTATACCCTATAAAGGAGATA
GGTTATACCCTAAACCCTAGCCCTTTTTGTTGTTTATCGTCTTCTTGTTATTTTATGGATTTTATTGAAATTGGTCATTCCTCTTCTCCAGTAGAGTCTA
TTATATTTTGGAGGCAACCTGTGGTATTTCTAGCATCGGATAATCAGGTTGCCTATCTCAGAGTTATTTGCGTTGGAGCAAGAGTTAAATTGAAGTTCTT
GCCGAAGCCGGGAGTTCAATCATATAAGTTAGTCTTATTTCAACCTAGTTCACAAATATAGATTAGTTAGATGGTTTAAGTCTATAGCAAAATATTAGAG
TTGAGACACTCTATAGCTTCTGCTGTAATAGTTAGCCACAATCTTGTAAATTCCCCTATTAATTTATGTAATAACATCTCCTTTGGAGCCTTGTTCAAAT
GTACGCAATGAAAATCCAGATTGTTGAAGCTGTATCAATCTACTGATCCAGGGCTTGATACAGTTAAACATGTCGATTTCCGAATCATTAGTTTTGGGAT
CCG