Detailed information on CNT3010627


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3021669Zea maysCitrullus lanatus99.1193.6494.682105forward

Expression of CNT3010627

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MKYECPRLSLLIITPIPKANTIGPESYDVIPC*

>peptide 2 (30 aa)
MKFPKITRACRPRLYTRWIHQCSARAAQNI*

>peptide 3 (30 aa)
MMRRRHEGRAIRQVIMNHRIGGQSPRQPFI*

>peptide 4 (30 aa)
MKFPKITRACRPRLYTRWIHQCSARAAQNI*

>peptide 5 (44 aa)
MRPSRKSGFVARISSRTTTVIRVARTIKQTITDLMSHSQFHSSN*

>peptide 6 (44 aa)
MLSQLFVFHKSKNFTSDYEIRMPPTVPINHYSDPEGQHNRTGIL*

>peptide 7 (50 aa)
MMLSHANVSRAMACFEHTNFFKVTAPEARPGQLRPGAHRRQKGRAGRFSP*

Sequence

>CNT3010627
GGGTATTACAGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGTCAACGCGAGCTGATGACTCGCGCTTACTAGGCATTCCTCGTTGAAGACCAACAATT
GCAATGATCTATCCCCATCACGATGAAATTTCCCAAGATTACCCGGGCCTGTCGGCCAAGGCTATATACTCGTTGGATACATCAGTGTAGCGCGCGTGCA
GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAACGGCCATAGTCCCTCTAAGAAGCTAACTACGGAGGGATGGC
TCCGCATAGCTAGTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAATTAACCAGACAAATCGCTCCACCAACTAAGAACGGACATGCACCACCACCCATAG
AATCAAGAAAGAGCTCTCAGTCTGTCAATCCTTGCTATGTCTGGACCTGGTAAGTTTCCCCGTGTTGATGTGTACAAAGGGCAGGGACGTAGTCAACGCG
AGCTGATGACTCGCGCTTACTAGGCATTCCTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCCCAAGATTACCCGGGCCTG
TCGGCCAAGGCTATATACACGTTGGATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGT
GGCCTAAACGGCCATAGTCCCTCTAAGAAGCTAACTACGGAGGGATGGCTCCGCATAGCTAATTAGCAGGCTGAGGTCTCGTTCGTTAACGGAATTAACC
AGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTCTCAGTCTGTCAATCCTTGCTATGTCTGGACCTGGT
AAGTTTCCCCGTGTTGAGTCAAATTAAGCCGCAGGCTCCACGCCTGGTGGTGCCCTTCCGTCAATTCCTTTAAGTTTTAGCCTTGCGACCATACTCCCCC
CGGAACCCAAAGACTTTGATTTCTCATAAGGTGCCAGCGGGGTCCTATTAGTAACACCCGCTGATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGAC
GGTATCTGATCGTCTTCGAGCCCCCAACTTTCGTTCTTGATTAATGAAAACATCCTTGGCAAATGCTTTCGCAGTTGTTTGTCTTTCATAAATCCAAGAA
TTTCACCTCTGACTATGAAATACGAATGCCCCCGACTGTCCCTATTAATCATTACTCCGATCCCGAAGGCCAACACAATAGGACCGGAATCCTATGATGT
TATCCCATGCTAATGTATCCAGAGCGATGGCTTGCTTTGAGCACACTAATTTCTTCAAAGTAACGGCGCCGGAGGCACGACCCGGCCAGTTAAGGCCAGG
AGCGCATCGCCGGCAGAAGGGTCGAGCCGGTCGGTTCTCGCCGTGAGGCGGACCGGCCGGCCCGGCCCAAGGTCCAACTACGAGCTTTTTAACTGCAACA
ACTTAAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAATGGATCCTCGTTAAGGGATTTAGATTGTACTCATTCC
AATTACCAGACACTAACGCGCCCGGTATTGTTATTTATTGTCACTACCTCCCCGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTG
GTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTCACCACCATGGTAGGCCCCTATCCTACCATCGAAAGTTGATAGG
GCAGAAATTTGAATGATGCGTCGCCGGCACGAAGGGCGTGCGATCCGTCAAGTTATCATGAATCATCGGATCGGCGGGCAGAGCCCGCGTCAGCCTTTTA
TCTAATAAATGCGCCCCTCCCGGAAGTCGGGGTTTGTTGCACGTATTAGCTCTAGAACTACTACGGTTATCCGAGTAGCACGTACCATCAAACAAACTAT
AACTGATTTAATGAGCCATTCGCAGTTTCATAGTTCGAATTAGTTCATACTTGCACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAGG
ATCAACCAGGTAGCACGTCCTCGC