Detailed information on CNT30106078


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30694488Oryza longistaminataOryza sativa88.7336.187.7252reverse complement
CNT30574703Oryza longistaminataOryza barthii94.017.2494.76267forward
CNT30116251Oryza longistaminataOryza nivara86.2716.1290.61245reverse complement

Expression of CNT30106078

Peptides detected in this lncRNA

>peptide 1 (29 aa)
VSLGHPQWLSISSLQEIHVSIFSYLEDIK*

Sequence

>CNT30106078
GTGTCCTTAGGGCACCCACAATGGTTATCTATAAGCTCTCTACAAGAGATCCATGTCAGCATATTTTCCTACTTGGAAGATATTAAATGAAGAGAGAGAG
CAAAGCTATCTACTAACTTAGAGATAGTCTATAGAGAAAAACAAGACAATGCATGAGAGAGCTATAAATACCCATGTAGACATACTATTGAGGTGGTTTA
CTATTAATCTAGTCTATTGCTGAGATGTACATGTTTTATAGAGAGCACCTTACTTTACCATTGCGGGTGCTCTAAGCCAGCTAT