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Detailed information on CNT30105637


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695004Oryza longistaminataOryza sativa21.297.4787.25102forward
CNT30224680Oryza longistaminataHordeum vulgare57.8341.0483.75277forward
CNT30575480Oryza longistaminataOryza barthii101.2589.4897.73485forward

Expression of CNT30105637

Peptides detected in this lncRNA

>peptide 1 (47 aa)
MTQLSPLKYTRWGKAHPLSKVKAIESFRRSSSDCAFPSGPACMSKSL*

Sequence

>CNT30105637
CTGATCTCTGAATATTTCAGGATTCAGAGCAGCAGCTCTTTGCACAAGCCAAAACATGGTTCCCTTTGAAGAAGATCTTGGCACAAGCCAAAAACATTGA
GCGTGTTTGAGGACCTGGAACCAAGATCATCTATGAAGCCAGGAAAGTAGCCAACACAATCCAAAATGCCAAGAGCGGGAGCGTCAATGGTTGTTTTGTT
AGAGGGCTTGCATTAGGCAACCATGGATATGCATCTGGAGGTGGCATGACACAATTGTCACCATTGAAGTACACACGGTGGGGGAAGGCCCATCCCTTGT
CAAAGGTGAAAGCCATAGAATCCTTCCGCAGAAGTAGTTCTGACTGCGCATTTCCAAGTGGGCCAGCTTGCATGAGCAAATCGTTGTAGAACTTTACTCC
CCAGAACATTGCAGTATCATCTAAAATAGAAGGAACAAATTCTGTCAGAGAGGTTGAAGGAGGGAGGGGCATGTCACAG