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Detailed information on CNT30104895


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SUV2|PT432_ARATH, E-value = 5e-22

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30553864Oryza longistaminataOryza glaberrima98.7861.0798.851219forward
CNT30246688Oryza longistaminataAvena sativa24.4744.8787.42302forward
CNT30370304Oryza longistaminataOryza glumipatula99.5988.4298.781229forward
CNT30551105Oryza longistaminataOryza brachyantha30.5595.9391.51377forward
CNT3063900Oryza longistaminataSelaginella moellendorffii8.2739.6984.31102forward

Expression of CNT30104895

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MKVYSSPPESRCKCKYFPKPINSLDLPSRSN*

>peptide 2 (47 aa)
MVSAEVLPTSKNTARFSAKAQSELVPNTKKSGRNVPTARSLGSSTNTH

Sequence

>CNT30104895
GGCAGTTGACGCATAGATGCATCAAGTTGAGAAACCATTCAAATTGAAAAGGTAGAAATACACAGCAGTAGATTATAATATTACAGTAAGCTCATTATAT
ATAGAAGATAACCACCAAAATACCAATATGTAGAAGTACATTTTTAGTACCTAGGCTACTAGTAGAACAAATAAATTTTAGGCAATGAGCGAGAGAGGCA
ACGAGGCTGTCTTTCTCTGGAACAAAAATAGCTGAATAAATAACAGGGTAACATGAAAGTTTACTCTAGTCCTCCAGAAAGTAGGTGCAAGTGCAAGTAT
TTTCCTAAACCAATAAATTCCCTTGATTTGCCCTCCAGATCCAACTAAAGTTAAATAAGTGAAAGAACAAACTGGTGTCCACCTCCTTGAAAGCAACCGT
AGACCAACCAAACTACAGTCTTTTGCACTTTGCACCAGATACCCTGCACAACATCCAACATAATTAGAACAAAGGGATACATACCAAGGAAGTGAACAAC
ATTCAAGAGTACTTTAGCAATGTCTCACGCAACATTACATAGGGCCCAAGCTTTCTTAGTTGCAACAAAGTGGATATAGTGATTATATAGACTACAAAGG
CTATTGCAACAAAGCATTTCAGATAGTATATGTTTTACACTTCACTAGTACTCCAGTAAACATATATAGCATTTCAGTAATAAATAAAAAAAATACAGGT
GTGTAAACTATAAAAGATCGCACATTTTTCCATCTATTAAATGCAAAAGATCACATTTTACTCCATAATTTATTGCTCTCCTACAACGGATCAAGGTAAA
GAACAAACACATTGAGAGTGCAACCAAAAGAGATAACACAGCCGGATTTAGGACCAACCAATTTGTGTGTGCCAGGATCAGATCTGGTGGTGGCTCTATG
CCTGGTTATCGCTCTTGCGATCACTGTGCCCATCGCGCTCCTGCAACAGCGAGCCAGCCTCCTCATCAGCCTGACTGATCTTCTTCTGCGCCTCCTTCGC
CTTGAGCGCCTGCAGCTTGACGTGGTTGTAGTATGCCACCCCCAAGAAGGCGATCAGCAGCCAGTCCTTGACCACCCCGGCGACATTCATGGTGAGCGCG
GAGGTCTTGCCGACGAGCAAGAACACCGCCAGATTCAGCGCGAAGGCGCAGAGCGAGTTGGTCCCGAACACGAAGAAGTCCGGGCGGAACGTGCCGACGG
CGCGCAGCCTGGGCAGCTCGACGAACACCCACGG