Detailed information on CNT30104865


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30604895Oryza longistaminataOryza punctata42.8127.4892.44119reverse complement

Expression of CNT30104865

Peptides detected in this lncRNA

>peptide 1 (59 aa)
LSPPPPPPRPPPPPSPPPXXXXXXXXXXXEEGRFRRRRGGGGGEWVVIVRRVLIPRRAS*

>peptide 2 (54 aa)
LPSPSPSPPTPPTLAAPXXXXXXXXXXXXRGEIPPPTRRWRGGVGCDREEGSHP*

>peptide 3 (46 aa)
SPLPLPLPAHPPHPRRPXXXXXXXXXXXXKRGDSAADEEVEGGSGL*

Sequence

>CNT30104865
CTCTCCCCTCCCCCTCCCCCTCCCCGCCCACCCCCCCCACCCTCGCCGCCCCCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAAGAGGGGAGAT
TCCGCCGCCGACGAGGAGGTGGAGGGGGGGAGTGGGTTGTGATCGTGAGGAGGGTTCTCATCCCTAGACGGGCGAGTTGAAAGGCGGCAAAGACGGCTAG
CGTTGAAGCGGTCGGGCGCGGCCACGCAGCTGCGCCGCCCACGCCCAGTGGGGGAGCCATCGCTTCTCCGGCGACGGC