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Detailed information on CNT30104732

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30555662	Oryza rufipogon	Oryza glaberrima	98.78	91.68	98.35	485	forward
CNT30597179	Oryza rufipogon	Oryza meridionalis	100	89.44	98.78	491	forward
CNT30371482	Oryza rufipogon	Oryza glumipatula	100	89.11	98.37	491	forward
CNT30578566	Oryza rufipogon	Oryza barthii	98.57	92.37	98.35	484	forward

Expression of CNT30104732

Peptides detected in this lncRNA

>peptide 1 (59 aa)
MSRRKLQSDEWWRIHARPCWYGLSDGYRRVVAEDIVADRSEREQYTRMCKNLSNNTSKL*

Sequence

>CNT30104732
CAGCAGTGGTGAAGGGTAGCTGGCTGCCGGCGCCCAGAAACCGGCGAGCAGAGCCGGCGTGGTGGGGCGGCAGCGAGGGATGAGCAGGAGGAAGCTGCAG
AGCGACGAGTGGTGGCGCATCCACGCGCGGCCGTGCTGGTACGGGCTGAGCGATGGGTATCGCCGGGTAGTGGCTGAAGACATCGTTGCTGATAGGTCTG
AAAGGGAGCAGTACACCAGGATGTGCAAGAACCTATCAAACAACACTTCGAAGCTCTGAAGTTTCAACTTCAGAGTTTACAACCCACACTCTGCTCCACA
TTTCATTTCTATCATGGGAGATGTCAAATAATTGTTGTAATGATTTGAGAAGACAAGTAGAGAATAAATAAATGAGTAGCCGAACATTATTCATGTACTC
TGTAGTTGAATCCATCAGGAGAGAAAGATATTTTTCTCATAAACAGGGTTGATCGGAAGTTAAAAATCAATAATGACAAAGAACATGAGCA