Detailed information on CNT30104694


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT002534, E-value = 1e-131

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3068536Oryza rufipogonLeersia perrieri53.148.4194.16137forward
CNT30371460Oryza rufipogonOryza glumipatula53.8855.6100139forward
CNT30578602Oryza rufipogonOryza barthii52.7154.62100136forward

Expression of CNT30104694

Peptides detected in this lncRNA

>peptide 1 (42 aa)
LKYKNQHHVNLKIIIPYIQESESGRPLASHPTCKQLNNHTSR*

>peptide 2 (42 aa)
MILLGNKRGKNEKTLKGKKVAGRANAFTAIYTSKANVVEGGGV

Sequence

>CNT30104694
AACTGAAGTACAAGAATCAGCACCATGTTAATTTAAAGATTATAATTCCATACATACAAGAATCAGAATCAGGCAGACCTCTTGCATCTCACCCTACTTG
TAAACAACTAAACAACCATACAAGCCGATGATCTTGCTAGGCAACAAAAGGGGAAAAAATGAGAAAACTCTAAAAGGAAAAAAGGTTGCTGGGAGAGCAA
ATGCATTCACAGCTATTTACACCTCAAAAGCAAATGTTGTTGAGGGAGGAGGGGTCAG