Detailed information on CNT30104593


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30553404Oryza rufipogonOryza glaberrima10028.3399400reverse complement
CNT30576076Oryza rufipogonOryza barthii100.258.9299.75401reverse complement

Expression of CNT30104593

Peptides detected in this lncRNA

>peptide 1 (33 aa)
PAHTVCYDIVLRICSYCFLARALLRKSEMKNSS*

Sequence

>CNT30104593
ACCAGCACATACCGTTTGCTATGATATTGTTTTGCGGATTTGCTCATATTGTTTTCTTGCCCGGGCATTGCTGCGGAAGAGTGAAATGAAAAACTCTTCT
TGAAGAAGAGGACTCTTCCGCTTGATCTTTTGATACGGTGAGGGAACAGGTTTTATGCGTTCTTTGAGCAAATGGGGAAACAAACTGCTGATACAGAAAT
CTTTAACTGAACTGCCGAAGGCACAAGAGAGACTATAGCCAGGAAGGATAAGCAAAGGAATCCAGATTCAATCGATTGTTTGAAGCCAAGGAGCAAGAAA
ACGGATGCGCGTGCTAACGCTTTCGCGCTAGTGCGCTCAATCCGTTGCTTGTTCTCGAGCTAGTCCATCTTTCTATACGAATTTCTTGAAAGAATACTTC