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Detailed information on CNT30104529


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697459Oryza rufipogonOryza sativa21.9134.59100101forward

Expression of CNT30104529

Peptides detected in this lncRNA

>peptide 1 (84 aa)
TISTVHTLDRQIITHKCSIFSLMLHIQMYQRSTESSITLWRKKYNHVHNGVIQTTVYLSTHAKYYPRSTNTLIHAVENRLQIVD*

Sequence

>CNT30104529
CACCATTAGCACTGTTCATACACTCGATCGTCAGATCATAACCCACAAGTGCTCGATCTTTTCTCTGATGCTACACATACAGATGTATCAGAGATCAACA
GAGAGTTCGATAACACTTTGGAGAAAGAAATACAACCATGTACATAACGGGGTTATACAGACGACAGTTTACTTGAGTACACATGCAAAATATTATCCTA
GATCGACTAATACACTGATACATGCAGTTGAAAACAGGCTGCAGATAGTAGATTAATTTATGTAGGTTTACTACTGATTAATTCCTCCTTGTATCGACTT
GGAGATTATGATTCAAGATTTCAAGGCCTGTTCCTCTTCTGCGTGTAGATGTAGTCGAGGAGAAGACGAAGTGGCTCGAGCTGTATTAGTGTAAGAAGCT
GGAAGAAGTGAGGAGCTAGCTAGTAGCTTGGCTAAGCTTTGGGTTTTTGGGTTTGTGTGAG