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Detailed information on CNT30104508

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30596088	Oryza rufipogon	Oryza meridionalis	100	9.2	100	552	forward

Expression of CNT30104508

Peptides detected in this lncRNA

>peptide 1 (42 aa)
MSIFHYFVWTLLLHLMLAFRLAFAGPTIGCTPIRNKIVHEGW*

>peptide 2 (40 aa)
MEKLFNVNLSLLCLDLASSLNACFPSCLCWAYDRLYSNTK*

Sequence

>CNT30104508
AGAGCGGATAGCAAGATCGAATGAATGGATACTCTGAGATAGAACGAGAAAAAGCAAATTTGATTAATCCTACAAAAGCCTTACAAGGCAGGTAAACTTT
ATGCAGTATCTGCTACAAAAAGAAGGTTAGAGAACAGGTTCCATCTACTTTATCCGCTTTTGGGCATGAAGAACATGCTTCTTTCTCAATTTATAGGAAT
CGTTAACCGCAACTCTCCTTTTCAGGCTTGGATTGGTTTTTTGATGCAGTAGAGAAGCCGTTTCCTTTGAACTTGGTCCATCGGACAGATATAGACATGG
AGAAGCTTTTCAATGTCAATCTTTCACTACTTTGTTTGGACCTTGCTTCTTCACTTAATGCTTGCTTTCCGTCTTGCCTTTGCTGGGCCTACGATAGGCT
GTACTCCAATACGAAATAAGATTGTACATGAAGGTTGGTGAAAAGCAAAAGAAGCAATTGGTTCTCAAATGCCGTGACGTCACCTAGCTTTATTCTAAAT
TTATCATTCTATCGGTATGTATAGTGTCTTTCATCTGCTTTTTCATTCATTC