Detailed information on CNT30104494


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30501325Oryza rufipogonCoffea canephora807.9585.87184reverse complement
CNT30618776Oryza rufipogonSesamum indicum70.877.8988.34163reverse complement
CNT3021612Oryza rufipogonCitrullus lanatus36.9641.8790.5985forward
CNT30401845Oryza rufipogonBeta vulgaris25.228.4491.3858reverse complement
CNT30655384Oryza rufipogonRosa chinensis66.5218.5988.89153forward
CNT30679583Oryza rufipogonTriticum urartu1004.9398.7230reverse complement
CNT3035046Oryza rufipogonCucumis melo78.266.9585180forward

Expression of CNT30104494

Peptides detected in this lncRNA

>peptide 1 (56 aa)
SAAEWDRLPARPSRKKLEQHCMRTYYPSSGTRGGTTSRSTYCSPGRASSSRRDFLF*

Sequence

>CNT30104494
TCTCTGCCGCGGAATGGGATCGCTTGCCAGCTAGGCCCTCTAGAAAAAAGTTGGAGCAACATTGTATGAGAACATATTACCCATCTTCGGGGACAAGGGG
CGGAACGACCTCTCGATCTACTTACTGCAGCCCAGGACGGGCGTCGTCGTCTAGGCGTGACTTCTTGTTTTGATCTCCCCTACGCCTAGGACGTAGTCTG
GGCCAAGAGCCATAGTTAGTTGCTGTTTCC