Detailed information on CNT30104429


BLAST search results

BLAST vs Swiss-Prot:
sp|Q6ENG7|ATPB_ORYNI, E-value = 9e-152

BLAST vs NONCODE:
NONORUT002105, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30673496Oryza rufipogonSetaria viridis13.3340.9395.4588forward
CNT30197557Oryza rufipogonPisum sativum50.7621.6188.66335forward
CNT30710344Oryza rufipogonGlycine max15.9122.1588.57105forward
CNT30224691Oryza rufipogonHordeum vulgare10.324.9110068forward
CNT30592630Oryza rufipogonMusa acuminata24.8536.287.8164forward
CNT30554166Oryza rufipogonOryza glaberrima90.7662.5399.5599forward
CNT3082983Oryza rufipogonBrassica juncea90.6124.9183.28598forward
CNT3018154Oryza rufipogonZea mays99.757.7295.29658forward
CNT30606970Oryza rufipogonGossypium raimondii28.0310.8884.86185forward
CNT30416813Oryza rufipogonPapaver somniferum99.3929.3986.13656forward
CNT30726985Oryza rufipogonLupinus angustifolius99.2430.2885.8655forward

Expression of CNT30104429

Peptides detected in this lncRNA

>peptide 1 (64 aa)
MNRECCTSIYRTQIVNRLPKNVENSSKSSSTDRNTERSSRVNHFHSSHQPICSTHSYSSNSIIS*

Sequence

>CNT30104429
GCGGTTCATTCATTTGGCCATAGACTAGAGCTACCTTTGATTCCTCAAGATTTTTTTCATTAATTACTCCAGATTCCTTCATTTCCATATAAAGATCATT
TCCTTCACGAGTCCGCTCCCCTACTCCGCCAAATACGGATACGCCCCCGTGAGCTTTAGCAATATTGTTGATTAATTCCATGATGAGTACTGTTTTACCT
ACTCCAGCTCCCCCAAATAGTCCGATTTTTCCTCCACGCCGATAAGGAGCTAAAAGATCGACCACCTTAATACCAGTTTCAAAGATGGATAATTTCGTAT
CTAACTCGATAAAGGCGGGCGCAGATATATGAATAGGGAATGTTGCACTAGTATCTACAGGACCCAAATTGTCAACAGGCTCCCCAAGAACGTTGAAAAT
TCGTCCAAGAGTAGCTCCACCGACAGGAACACTGAGAGGAGCTCCCGTGTCAATCACTTCCATTCCTCTCATCAACCCATCTGTAGCACTCATAGCTACA
GCTCTAACTCGATTATTTCCTAATAATTGTTGTACCTCACAAGTTACATTAATTTGCTTACCGTCAGTGTCTCGACTCTTGACTACCAAAGCATTATAAA
TATAAGGTAACTTGCCCGGGGGAAAAGTGACATCCAGCACGGGTCCAATAATTTGATCGA